Gene Avi_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1593 
Symbol 
ID7387394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1334376 
End bp1334906 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content61% 
IMG OID643650943 
Producthypothetical protein 
Protein accessionYP_002549148 
Protein GI222148191 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.419241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCCC GGTTTGCGAG CCATATCCGG GATGCCTTCA GCCACGCGAC CGCCGCAGCT 
TTAGCTGCGG CGGTCGCTTT TTATGGTGCC CACTGGCTGT TCGGCCACCA GCAGCCGATT 
TTTGCCGCCA TAGCCGCGAT CATCTGTCTG GCTCCGGGCA TTCCCAATCA CCTGCGCCAA 
GGCATCAATG TTGTCATTGG CGTGACCATC GGCATCGCGG TCGGCGAGCT GATCTTTCTC 
CTGCCGATAA GTGTGCTCGG CGTGCAGATT TCGCTCGCCA TATTCGCCGC GATGTTTCTG 
GGCGCGCTGG CCAATCTGGC ACCCGTCACG CCTATCCAGG CTGGCGCCTC AGCACTTCTG 
GTCATCCTGC TTGGCCCTGC GACCGGTGGG CTGGTGCGCT TTCTCGATGT CATCATCGGC 
GTCTCCACCG GACTTGTCTT CGCGCTCATC CTGTTTCGCA ATGCGACGAC ACTGCATGAC 
ACGGCTATCA CGCCCAGCAA CGATGCAGGG CAGGGGCCGC AGGAAAAATA G
 
Protein sequence
MWSRFASHIR DAFSHATAAA LAAAVAFYGA HWLFGHQQPI FAAIAAIICL APGIPNHLRQ 
GINVVIGVTI GIAVGELIFL LPISVLGVQI SLAIFAAMFL GALANLAPVT PIQAGASALL 
VILLGPATGG LVRFLDVIIG VSTGLVFALI LFRNATTLHD TAITPSNDAG QGPQEK