| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1100 |
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| Symbol | |
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| ID | 7386179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 929673 |
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| End bp | 930392 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650583 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548791 |
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| Protein GI | 222147834 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3807] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00740954 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGA AACGCCCCCT GACTGCCAAA GGCGGTTTCA CATACAGGCT CCAAGATGAC
GACGCATTCT CGTTTTCAAC AGATTTCGAC GATCTCAAAT GTATCGAGGC CTTGAGACAT
TTGAAAAGGG AATACGGTCC GTCATGTTCA GTGGCTCCCC GTGTGAACCG CCGCGCCCTG
CTGGCCACCC TGTTGCTGAC CCCGTTGATC GGGGCGGCAA GCCTGCTTGC GCCCGGCACG
GCTGCGGCCA TGCCGATGCT GCGGCAGACG GGTCGCGTCA CCGGCTATCC GCTACCGCGA
TTTGCCTCGT TGAAGGCCGA CAGGGTGCGG ATGCGGGCTG GCCCTTCCAC CGATTACCCG
GTCCGCTTTA TCTACGAGGC ACGGGGGCTA CCGGTGGAAA TCATCGAGGA ATATGACAAT
TGGCGGCAGG TTCGCGACAG CGACGGCACC AGCGGCTGGA TGTCGGCTGT CATGCTCAGC
GGCGCGCGCA CCGGCCTTGT CGCCCCCTGG CGCGGCTCAA AAGGCGATCT CGTCATGCTG
CGCACCCGCC CCCTTGCCAC GGCTGCCATC ACCGCCCAAC TCCAGCCACG GGTACGGCTG
AAAATCGGCG GCTGCGATGG GCATTGGTGT TCCGTCTCGG TAGAACGAGG TGGCCCTTCC
GGCTTTGTCC GGCAGGGCCT GGTCTGGGGC GTTTATCCCG GAGAAACCAT CGGCAATTGA
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| Protein sequence | MPEKRPLTAK GGFTYRLQDD DAFSFSTDFD DLKCIEALRH LKREYGPSCS VAPRVNRRAL
LATLLLTPLI GAASLLAPGT AAAMPMLRQT GRVTGYPLPR FASLKADRVR MRAGPSTDYP
VRFIYEARGL PVEIIEEYDN WRQVRDSDGT SGWMSAVMLS GARTGLVAPW RGSKGDLVML
RTRPLATAAI TAQLQPRVRL KIGGCDGHWC SVSVERGGPS GFVRQGLVWG VYPGETIGN
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