| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0886 |
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| Symbol | intD |
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| ID | 7387693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 748068 |
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| End bp | 749117 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643650420 |
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| Product | phage-related integrase |
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| Protein accession | YP_002548629 |
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| Protein GI | 222147672 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.280114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGGGA GCGGGATCGT GCGCGTAAAG CTTAAGGGGC TGAATAAGGT CAAAAAGAAG
CTGGCAGACG GAACGCCCGT TACATACTTC TACGCCTGGA AAGGCGGCCC GCCGTTACCA
GGAAAGCCGG GTGATCCTGA ATTTATGGCC GCATATAATG CGGCCATTTC TCGCAAGGTG
GAGCCTCAGG CTGGAACATT GCAATCGATC CTGAATGCAT TCCAGGTGAG TTCCGATTGG
GATGATTTGG CCCCGCGCAC GAAGTCGGAC TATGTGAAGC TGATCAAGGT GATCGAAAAA
GAGTTCGGTA CATTTCCAAT TTCCGGCCTC AAGAACAGAC GTGCAAAGTC AATCTTTCTC
TCATGGCGGG ATGAGCGGGC AAGAGCGTCT CGCCGTCAAG CTGATTATGG TTGGCAAGTT
CTGGCGCGTA TTCTCTCATG GGCGCTTGGT CGCGGTCTCA TTGAGGCGAA CCCCTGTGAA
AAGGGTGGGC GGCTCTATCA GGGTTCGCGG GCCGAATTTG TTTGGACGGG TGACGATGAA
GCCAATTTCC TTGCATCTGC ACCGCCGCAC CTTCATTTGG CGCTAATACT TGCTCTTTGG
ACTGGGCAAA GGCAGGGCGA CCTATTGGCC CTGACGTGGC CGCAATACGA TGGTGAGCGG
ATTCGGCTTA AGCAAGGAAA GACCGGGGCG CGGGTGGTGA TACCTGTCGG CGGGCCGCTT
AAGGCAATGC TTGACCCGAT CCGGCAAAAG GTGGGCCATG TGCTTCTTAC GCTTGATGGT
ACGCCATGGA CTTCGGGCGG CTTTTCATCG TCGTGGCGCA AAGCCTGCGC GGCGGCTGGC
GTCGTCGGTG TAACGTTCAA CGACCTACGA GGAACAGCCG TCACGCGCCT TGCGCTTGCC
GGATGCACGG AAGCTGAAAT TGCGACTATC AGCGGCCACA GCCTGCGCGA CGTTCGCTCA
ATCCTTGATT CCAACTACCT GAACAGAGAC CCAGAGCTTG GCGAAAACGC TATTCGGAAG
CTCGAAGGGA GAACAAAGTT TCCCAACTGA
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| Protein sequence | MYGSGIVRVK LKGLNKVKKK LADGTPVTYF YAWKGGPPLP GKPGDPEFMA AYNAAISRKV
EPQAGTLQSI LNAFQVSSDW DDLAPRTKSD YVKLIKVIEK EFGTFPISGL KNRRAKSIFL
SWRDERARAS RRQADYGWQV LARILSWALG RGLIEANPCE KGGRLYQGSR AEFVWTGDDE
ANFLASAPPH LHLALILALW TGQRQGDLLA LTWPQYDGER IRLKQGKTGA RVVIPVGGPL
KAMLDPIRQK VGHVLLTLDG TPWTSGGFSS SWRKACAAAG VVGVTFNDLR GTAVTRLALA
GCTEAEIATI SGHSLRDVRS ILDSNYLNRD PELGENAIRK LEGRTKFPN
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