| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0586 |
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| Symbol | pyrD |
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| ID | 7388980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 502524 |
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| End bp | 503615 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650208 |
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| Product | dihydroorotate dehydrogenase 2 |
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| Protein accession | YP_002548420 |
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| Protein GI | 222147463 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATC CGTTCAAGCG TTTCGCTCGC CCAGGCCTGT TTCTGTTCGA TGCCGAAACC
GCCCATGGCC TGTCGATTGC CGGGTTGAAA ACCAGCCTGA TGCCGAAATG CCACTTGCCG
GACGATCCCA GGTTGGCGCA GACTGTTGCT GGTCTGCATT TTCCCAACCC ACTCGGCATG
GCGGCAGGCT ATGACAAAAA CGCTGAAGTG CCGGACGAAT TGCTGGGTCT CGGCTTCGGC
TTTGCAGAAG TGGGAACGCT GACGCCAAAG CCGCAGGGCG GTAATCCCAA GCCCCGGATT
TTCCGGTTGG TCCGCGATGA GGCCGTCATC AATCGTCTCG GATTTAATAA TCAAGGTCAT
GAGGCTGCCT TTGCCAGGCT GTCGGCGCGA GCAAGCCGGC CGGGCGTGGT CGGCATCAAT
ATCGGTGCCA ATAAGGATGC CGAGGACCGG ATTGCCGATT ATGTCACGGG CATTCGTCGC
TTTTATCCGC TGGCCAGCTA TTTCACCGCC AATATTTCCT CGCCCAACAC GCCGGGCCTG
CGCGATTTGC AGGCAAAGGA TAGTCTCGGT CATCTGCTGG ACGCGGTGCT TGCCGCCCGC
GCCGATGAAG CGGCCAAGGC GGGCCGTCGG GTGCCGGTCT TCCTGAAAAT CGCCCCTGAT
CTGACCGAGG AAGGCATGGA TGACATTGCC GAAGTGGTTC TGGCCCGCGA TCTGGATGGG
TTGATCGTCT CCAACACCAC GCTGTCGCGC GATGGCCTGA CGGATACAAG GCAGGCGGGC
GAGGCGGGCG GATTGTCGGG CAAGCCCTTG TTCGAGAAAT CGACGGCGGT GCTGGCGCGT
ATGCGCCACC GGGTTGGCTC GGCCCTGCCG ATCATTGGCG TCGGCGGTGT TTCCTCGGCG
CAGACGGCGC TGGAGAAAAT CAAGGCCGGT GCCGATCTGG TGCAGCTCTA TTCCTGCATG
GTGTATGAAG GGCCGGGCCT GCCCGCCGCC ATCGTCAAGG GCCTGTCACA GGCGCTGGAC
CGCGATGGTA TTGCCTCGAT TGCGCAACTG CGTGACAGCA GGGTTGATTA CTGGCGGGCG
CTGAAGGTCT GA
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| Protein sequence | MIDPFKRFAR PGLFLFDAET AHGLSIAGLK TSLMPKCHLP DDPRLAQTVA GLHFPNPLGM
AAGYDKNAEV PDELLGLGFG FAEVGTLTPK PQGGNPKPRI FRLVRDEAVI NRLGFNNQGH
EAAFARLSAR ASRPGVVGIN IGANKDAEDR IADYVTGIRR FYPLASYFTA NISSPNTPGL
RDLQAKDSLG HLLDAVLAAR ADEAAKAGRR VPVFLKIAPD LTEEGMDDIA EVVLARDLDG
LIVSNTTLSR DGLTDTRQAG EAGGLSGKPL FEKSTAVLAR MRHRVGSALP IIGVGGVSSA
QTALEKIKAG ADLVQLYSCM VYEGPGLPAA IVKGLSQALD RDGIASIAQL RDSRVDYWRA
LKV
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