Gene Avi_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0443 
Symbol 
ID7388454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp378110 
End bp378532 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content53% 
IMG OID643650098 
Producttranscriptional regulator 
Protein accessionYP_002548313 
Protein GI222147356 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.54716e-05 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGAAA ACAAAAAGAA GCCTAACCCC ATCGACATTC ATGTCGGTAG CCGGATTCGT 
CTTCGCCGCA CCATGCTCGG AATGAGCCAG GAAAAGCTGG GCGAAAGCCT CGGCATTACG
TTTCAACAAA TTCAGAAGTA CGAAAAAGGC ACAAATCGTG TCGGCGCCAG CCGCTTGCAG
AATATTTCAA GCATTCTGAA TGTACCCGTC TCGTTCTTTT TCGAGGATGC ACCGGGTGAG
CAGGTTGTAG CAGGCGCCAA TGGCTTTTCC GAGGCGGCCA GTTCCAACTA TGTCGTCGAC
TTCCTCTCGT CTTCCGAAGG CCTGCAGCTG AACCGCGCTT TCGTAAAGAT CAACGATCCG
AAAGTGCGCC GTAAAGTCGT CGATCTGGTC AAGGCGCTTG CCGCCGACGC AGACGCGGAA
TAA
 
Protein sequence
MLENKKKPNP IDIHVGSRIR LRRTMLGMSQ EKLGESLGIT FQQIQKYEKG TNRVGASRLQ 
NISSILNVPV SFFFEDAPGE QVVAGANGFS EAASSNYVVD FLSSSEGLQL NRAFVKINDP
KVRRKVVDLV KALAADADAE