| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0438 |
|---|
| Symbol | phoH |
|---|
| ID | 7388450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 373484 |
|---|
| End bp | 374557 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643650094 |
|---|
| Product | phosphate starvation inducible protein |
|---|
| Protein accession | YP_002548309 |
|---|
| Protein GI | 222147352 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.695996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCAA CAGAAGTGGT AACCTCACCC TCGCGCAACA CCAAAACCGC CGCGACCGAC
GCCAATCACT TCATCTTGAC GTTCGAGAAC AACCGGCATG CCAGCGAGCT TTTCGGCCAG
TTCGAACAAA ACCTGAAGTT GCTGGAGCAG CGGCTGAATA TCAAAGCCAG TGCGCGCGGC
AATTCCGTGT CCATCTCCGG CGACATCATG GCCACCAACC AGGCGCGCCG GGCGCTCGAT
TTCCTCTATG CCAGGCTGCA AAGCGGCGGC AGCGTCGAAG CTTCTGACGT GGAAGGCGCG
ATCCGCATGG CGGTGGCCGC CGACGACCAG CTGACCTTGC CGACGCTGGA GCGCAAGGCC
AAGCTCAGCA TGGCGCAGAT TTCCACCCGC AAGAAAACCA TTGTTGCCCG CACACCGACC
CAGGATGCCT ATATGCGGGC GCTGGAACGG TCCGAACTGG TGTTCGGTAC TGGCCCGGCT
GGCACCGGCA AGACCTATCT GGCCGTGGCG CAGGCCGCGC AATTGCTGGA ACGTGGCGCC
GTCGACAAGA TCATCCTGTC GCGCCCGGCG GTCGAGGCGG GCGAACGGCT GGGCTTCCTG
CCCGGCGATA TGAAGGAAAA GGTCGATCCT TACCTGCGGC CGCTCTACGA CGCCCTCTAT
GATATGATGC TGGGCGACAA GGTGGAGCGG GCGATTACCG CGGGCGTAAT CGAAATTGCC
CCGCTGGCTT TCATGCGCGG GCGCACGCTG GCCAATGCCG CTATCATTCT TGATGAAGCA
CAGAACACCA CATCCATGCA GATGAAGATG TTTCTGACGC GGCTTGGCGA AAATTCCCGG
ATGATCATTA CCGGCGACCC GAGCCAGGTG GACCTGCCGC GCGGTGTAAA ATCCGGTCTG
GTTGAGGCCT TGGATATTCT GGCTGGCGTG GAAGGCGTCT CTTTCGTGCG CTTCAAGGAT
GTCGATGTTG TGCGTCACCC GCTTGTCGGG CGGATCGTCA GGGCCTATGA TGCCCAATAT
GCGCAGCCTG AGCCTCACTA TACGCAGCCT CTCGAAGGCG AGAAGCCGGA ATAA
|
|---|
| Protein sequence | MNATEVVTSP SRNTKTAATD ANHFILTFEN NRHASELFGQ FEQNLKLLEQ RLNIKASARG
NSVSISGDIM ATNQARRALD FLYARLQSGG SVEASDVEGA IRMAVAADDQ LTLPTLERKA
KLSMAQISTR KKTIVARTPT QDAYMRALER SELVFGTGPA GTGKTYLAVA QAAQLLERGA
VDKIILSRPA VEAGERLGFL PGDMKEKVDP YLRPLYDALY DMMLGDKVER AITAGVIEIA
PLAFMRGRTL ANAAIILDEA QNTTSMQMKM FLTRLGENSR MIITGDPSQV DLPRGVKSGL
VEALDILAGV EGVSFVRFKD VDVVRHPLVG RIVRAYDAQY AQPEPHYTQP LEGEKPE
|
|---|
| |