Gene Avi_0164 details

Gene Information

• Locus tag: Avi_0164
• ID: 7388329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 154495
• End bp: 155109
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643649885
• Product: hypothetical protein
• Protein accession: YP_002548103
• Protein GI: 222147146
• COG category: [S] Function unknown
• COG ID: [COG0779] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.89885
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCCGAAC ACGTGCCAGC CGATGAGGCG CCCGAGCCAC GTCTGATTAC CGAAACCGGC 
CTCGACCGGC GCATCGCCGA TATTATCGAG CCTGTTATTG TCGAACTTGG TTTCGAGCTC 
GTTCGCGTGC GGATCCTCAA CCAGAACGGC ATGACGCTGC AAATCATGGC TGAGCGCAAG 
GACGGTACGA TGACCGTCGA GGATTGCGAA GAACTGTCCA TGGCGATTTC TCCGGTTCTG 
GATGTGGAAG ATCCGGTCGA TAAGGAGTAT CATCTGGAAG TCTCGTCGCC CGGTATCGAC 
CGTCCGATGG TGCGCGCATC CGATTTCACG CGTTGGCAGG GCAACCTGCT GAAATGCGAA 
ACGTCCATTC TGATCGACAA TCGCAAGCGT TTTCGTGGCA AGATTGCCGA TGTCACCCCT 
GACGGTTTCA TTCTGGAGCG CGATCAGGTT GCTTACGGGG AAGAGCCGCG GCTCACCATC 
CCGTTTACGG CATTGGCCGA GGCCAAGCTG ATCCTGACGG ATGATCTGGT CCGCGATGCG 
CTGCGCGCCG ACAAGCAGGC AAAGGCAGCG GCTGAAGCTG CAAACCAGAA CGACGAAACC 
GGCGAAGACC AATAA 

 

Protein sequence

MSEHVPADEA PEPRLITETG LDRRIADIIE PVIVELGFEL VRVRILNQNG MTLQIMAERK 
DGTMTVEDCE ELSMAISPVL DVEDPVDKEY HLEVSSPGID RPMVRASDFT RWQGNLLKCE 
TSILIDNRKR FRGKIADVTP DGFILERDQV AYGEEPRLTI PFTALAEAKL ILTDDLVRDA 
LRADKQAKAA AEAANQNDET GEDQ