Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6253 |
Symbol | |
ID | 7381294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 1245155 |
End bp | 1246363 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643649716 |
Product | MFS permease |
Protein accession | YP_002547940 |
Protein GI | 222107149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.244233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCAG TTCTCTCCAT AATCGCCGCC AATCCGGGTA TCCGGATTAG CGCGATTGCG ATTTTCTTCT TCGGCTTGTC CGGTGCGACC ACGGCTCCCT ATATGTCGAT CATCGGCATC CACGAGTTGG GATTGAGCAA TGCACATTAC TCGCTGCTGA TCTTCATCGC GTCCTGCGTC AATGTCGCCG CCAGCGTTGC CGTGGGGATA TTGGCCGACA GGCTTGGACA TTTCCGCATG CCGATGGTGA TCGTCAGCTT GTTTGGTGTG GTCGGTTATG GGGTGGTGTT TCTCGAACCG AACCAGATCA TTTTCGTCGC CTCGGCGCTG GTGTTGCTGC CGGTTTATAA TGCGTTGAAT TCGCTGATAT TTGCCAATGT GCGTGCCGCA TCCAAGGATA TGCCGGTGCG TGAGTTGATT GCAGTCAATT CCGGCGTGCG GGCCGTTATC TCGGCTTCCT GGGTCTTGGT ACCCGGTCTG GTAGGCTTCT TTCTGGCTGG TCAGAAAAGC ATGCTGCCTG CCTTTCTGTT TGCCAGCCTC GGCGGACTTG CCTGCTTCAT GTTGTTTCTG GTCTGGTTGC CGAAGGCGGA GGCAAGGGCC GAACCCTCCG CAAGTCTGGC GTTTTTTTCA TCCTTGTCGA AAATCGCTTC GCCAGGATTA TTGTTGCGGC TTGGCGCCAT CGCGCTGATC ACCGCCATGC TGCAAATGAA CGGCGTCGTG CTGCCCCTTG TCATGACCGG GCCAGCACAT GGCACGACCG GCGATGTCGG TATTATCGTC GGTATCGTTG CCTTTCTGGA AATCGTCTTC ATTCTGTTCT GGGGCTGGGT GGAGCGCAAA ACCTCCAGTG TGGCGACGCT TGTTGCCGGT TCGCTGATCT ATTGCGTCTA TCTGCTGGGC CTCGGCCTCG CCTCGCGGCC AGAACATGTC TATCTGCTTT CCGGCATTGC CGGTTTCGGG GCGGCGGCTA TTATCAGCGT GCCGATTACC TATCTGCAAA ACCTGATTGC CGATCGAGCC GGACTTGGTA GCTCGCTTAT TGCGGTGAAT ATCTTCCTGA GCGGTGGATT GAACTCGCTG CTCTTTGCTT TCGGCACCGG GGTCAGCAAT TATTCAGGCA CGGCAATGCT CGGTGCCCTG GCTGGCTTCT GCGGTATTTT GCTGTTGCTG ATACTGGAAA AGCCACGGTC CTTCAGGGGC GCTCAATGA
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Protein sequence | MPPVLSIIAA NPGIRISAIA IFFFGLSGAT TAPYMSIIGI HELGLSNAHY SLLIFIASCV NVAASVAVGI LADRLGHFRM PMVIVSLFGV VGYGVVFLEP NQIIFVASAL VLLPVYNALN SLIFANVRAA SKDMPVRELI AVNSGVRAVI SASWVLVPGL VGFFLAGQKS MLPAFLFASL GGLACFMLFL VWLPKAEARA EPSASLAFFS SLSKIASPGL LLRLGAIALI TAMLQMNGVV LPLVMTGPAH GTTGDVGIIV GIVAFLEIVF ILFWGWVERK TSSVATLVAG SLIYCVYLLG LGLASRPEHV YLLSGIAGFG AAAIISVPIT YLQNLIADRA GLGSSLIAVN IFLSGGLNSL LFAFGTGVSN YSGTAMLGAL AGFCGILLLL ILEKPRSFRG AQ
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