| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5466 |
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| Symbol | |
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| ID | 7381557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 466285 |
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| End bp | 467784 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649064 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547301 |
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| Protein GI | 222106510 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.1846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCAGT TTATTTCAGG GGTTTCTCAC TTGGGAGCTT ACCAAGCGAA AAGCAGCATT
TCGCCTGCCC GCAAGACAGT CGTTATTGTC GGTGGAGGGT TTGCCGGCGC GTCAGTAGCG
CGGTTTCTGG CGGAGCGGCA GGACGAGGAT CTGCAAATTC TGGTATTTGA GCCGAGAGCC
ACGCTGGGGG CCGGTCTTGC CTATGATACG GACGATCCGG CACTTCGTCT CAATGTTGAA
GCAAGCCGGA TGATAGCCGA TGCTAGGGAG CCACTCGCCT TTGCCGAGTG GTTACGGCAA
TCTGGCGCGC TTGCGGACGA TCCTGACGCG CAGGTCGAAT GCACAGGCAG TGATGTCCCG
CAGGTGTTTG CCCGCCGTGA AGCCTTCGGT CGTTTCATGG CGGAGCGGAT GGCGCCTTAT
CTTGAAGAGG GTAGGATTCA GCACATCCGG GAGACGGTGG AAAGCGTGAC CCGGATCGGG
AGCCGCTGGT TGGTGACCGG CAATTTGGGT GCCTGGATCG AGGCCGATAT CGTCGTCATG
GCAGCCACCC ACCCGGCTCC CAAGGCGCCG CGGGCATTGC AATCAGCCCT GCAAGGCCAT
CCACGCTTCC TTACCAATCC CGTCGCGGGC CCGAGCCTTT GCGGTTTCCG TGCGACGGAT
CGGGTTCTTG TCGTGGGCAT GGGTCTGACG GCAGCGGATA TTGTCGCCAG TTTGAGTGTC
CGTGGCCATC GCGGCGAGAT CACCGCCTTT TCAAGGCGCG GCATGTCGTC TCGCGGCCAT
ACTCTTCAGC CCCAGGACTG GTCTTGCTCG TTTAGCGAGG ATGATTGTCG CTCGGTAAGG
TCGTTGTTAC GAGCCGTGCG GCGTGCGGTG GCCGATGCGC AGGCCCATGG CGTGACTTGG
CATGCGGTGA CCGACGCCCT GCGTAAACAG GGTCAGACCA TTTGGGCGCG GCTCAATGCG
ACGGAAAGAA AACGGCTGTT GCGCCACGCC CGCCGTCTTT GGGACGTGCA TCGCTACCGG
CTGCCACCCC AGGCACAAGC CATTTGGCAG CAGCGGTTGG CTGAAGGCAG TCTGACGCTC
GCCTCAGGCC GGATGATTAA GATCGAGCGG GGTATCGAGA CCATCGCTAT TGATCTCGTG
GTGGCCTCGA CCGGGTTGGT GGAGCGGAAA TTGTTCGACT GGGTGGTGCT GGCGACAGGT
CCCGATCATG CCAGTGTTCT AAAATCACAG TCGATGTTGT TGACGCTGGA AAGCACGGGC
CACCTCCAGG CCGATGCCTA CGGGCTCGGT ATTGCCTGTG ATGAGACTGG TCAGGCCATT
GGTATTGATG GGCGACCGCA AGCGGATTTG TTTATTGCAG GCCCGCTGGC ACGCGGTACG
TTTGGTGAGC TTATGGGCGT CCCGGAAGTC TCCCGCCAGG CCGAACTGGT GGCAGATCGT
ATCGCCAATG CCGTCTTGGC TAGCCGCAGC ATGGCGAGCC ATAGCATCGA AGCGCGATAG
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| Protein sequence | MLQFISGVSH LGAYQAKSSI SPARKTVVIV GGGFAGASVA RFLAERQDED LQILVFEPRA
TLGAGLAYDT DDPALRLNVE ASRMIADARE PLAFAEWLRQ SGALADDPDA QVECTGSDVP
QVFARREAFG RFMAERMAPY LEEGRIQHIR ETVESVTRIG SRWLVTGNLG AWIEADIVVM
AATHPAPKAP RALQSALQGH PRFLTNPVAG PSLCGFRATD RVLVVGMGLT AADIVASLSV
RGHRGEITAF SRRGMSSRGH TLQPQDWSCS FSEDDCRSVR SLLRAVRRAV ADAQAHGVTW
HAVTDALRKQ GQTIWARLNA TERKRLLRHA RRLWDVHRYR LPPQAQAIWQ QRLAEGSLTL
ASGRMIKIER GIETIAIDLV VASTGLVERK LFDWVVLATG PDHASVLKSQ SMLLTLESTG
HLQADAYGLG IACDETGQAI GIDGRPQADL FIAGPLARGT FGELMGVPEV SRQAELVADR
IANAVLASRS MASHSIEAR
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