| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9098 |
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| Symbol | |
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| ID | 7367817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 67960 |
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| End bp | 69096 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643644306 |
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| Product | bacteriophytochrome protein |
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| Protein accession | YP_002542603 |
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| Protein GI | 222083200 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.384054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGC CGGTCAAATT CCTGCTCGTC GACGATCTCC CCGAGAACCT TCTCTCTCTT
GAGGCGCTCC TCCGGCGTCC TGATCTCGAA CTCGTCAAGG CAAGGTCGGG CGACGAGGCG
CTCGAGCTAT GCCTGCACCA TGATTTTGCA CTGGCGCTGA TCGACGTTCA GATGCCGGGC
CTGAATGGTT TCGAGCTTGC CGAACTGATG CGTGGCAACG AGCGGACCAA ACGCATACCG
ATCATCTTCG TTACAGCCGG CGCGCACAGC TCCGAGCGGC GCTTTCAAGG CTATGAGGTC
GGCGCCGTCG ACTTCATCCA GAAGCCGATC GAAGCCCATA TCCTTCGCAG CAAGGCGGAT
GTTTTTCTGG AAGTCTACCG CCAGCGCCAG ACGCTCGCCG AGCAGCGGGA TCTACTGCAA
TCCCAGGCTC AGGCTCTACA GCTTGCCGAC AAGCGCAAGG ATCAGTTCCT TGCCGTACTT
GCTCATGAAC TCCGCAACCC GCTCGCCGCT CTGCAAGGCG GCCTTTCGCT CCTGAAGAAA
GTTAACGGTG AAGAACAGAC CGCAAAGATC GGAAAGCTGA TGCAAGAGCA GATCACTCAC
CTCAGCCATC TGGTGGATGA TCTCCTAGAT GTATCGCGAA TTACGCAGGG CAAAATCGTC
CTTCGCAAGG CCTTCTTCGA CCTGCGGGAC GCAGTCGAAT CCGCTGTCGA CATGACCCGG
CCAGCGATCG ATGCGAAGGG CCACAATCTA GTCGTTAAAC TTCCCGAGCG GTCATGCGAC
GCCATGGCAG ACAATGTCCG AATTACACAA TGCCTTGCTA ATCTTTTGAA CAACGCAGCC
AAGTACACGC CGGATGGCGG TCAGATCTAC GTCGAGCTCG TAGAAGACGT CGAGTCTTTC
CGCCTAACTG TTTCGGACAA TGGTCTTGGA CTGACGCAGG AGGCTTCAAC GACCATCTTC
GCCATGTTCG CTCAGGTCGA TGGTCACCGG GAACATTCTC ATGGAGGGCT CGGAATCGGG
CTTGCACTCG TAAAGCAGCT TGTAGAGCTT CACGAGGGCA GCATCACCGT GCAGAGCGAC
GGACCTGGCC GTGGGAGTGC ATTCGTTCTC AACCTACCGA AGGCTATCGA ATTGTGA
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| Protein sequence | MNTPVKFLLV DDLPENLLSL EALLRRPDLE LVKARSGDEA LELCLHHDFA LALIDVQMPG
LNGFELAELM RGNERTKRIP IIFVTAGAHS SERRFQGYEV GAVDFIQKPI EAHILRSKAD
VFLEVYRQRQ TLAEQRDLLQ SQAQALQLAD KRKDQFLAVL AHELRNPLAA LQGGLSLLKK
VNGEEQTAKI GKLMQEQITH LSHLVDDLLD VSRITQGKIV LRKAFFDLRD AVESAVDMTR
PAIDAKGHNL VVKLPERSCD AMADNVRITQ CLANLLNNAA KYTPDGGQIY VELVEDVESF
RLTVSDNGLG LTQEASTTIF AMFAQVDGHR EHSHGGLGIG LALVKQLVEL HEGSITVQSD
GPGRGSAFVL NLPKAIEL
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