Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7599 |
Symbol | |
ID | 7380254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 541652 |
End bp | 542314 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643641606 |
Product | hypothetical protein |
Protein accession | YP_002539903 |
Protein GI | 222102864 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACC ATACCCATTT CGATTTCGCC AAGCTCAACG AGCGGGAGCG TTACAAGCTC CTGATCGGAA CCGTGATTCC ACGCCCGATT GCGCTGGTAA CGACAGTGAG CAAGGATGGC CAGCCGAATG CTGGTCCGTT CAGCTTCTTC AACGTCCTGA CCCACGATCC GGCAATCGTC GCCATCGGTG TCGAGAACTA TTCGGACATG CGCTTCAAGG ACACCGCCCG CAATATCCGT GAGACGGGTG AATTCACGGT CCATATCTGC GACAATGCGC TGGTTGACCG GATGGAAGTT TGCGCCATCA AGTTCGGCCC CGAGGTCGAC GAGATGGAAG AGGCGGGTCT TGCGACCGTT CCCGGTCGGA TGGTGCGCAG CCCCCGTATT CTGGCCGCTC CTGCGGCTCT GGAATGCCGT CGCCACACAA CGCTTCAGGT CGGCCCGGCC CGCGAGATCA TTCTCGGCGA GGTCATCGGC GTGTTTGTCC GCAGCGATGC AGTCAATCCT GCCAATCTGC ATATCGACCA GCAGCTTATG GATGCCGTCG GCCGCATGGG AGGACACACC TATGCCCGCA CCCGTGACCA GTTCGACATC AAAACGCTGA CACCTCAGGA ATGGGAGATC CGGAAGATTG GCGAGAAGCT GACGACAGAA TAA
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Protein sequence | MTDHTHFDFA KLNERERYKL LIGTVIPRPI ALVTTVSKDG QPNAGPFSFF NVLTHDPAIV AIGVENYSDM RFKDTARNIR ETGEFTVHIC DNALVDRMEV CAIKFGPEVD EMEEAGLATV PGRMVRSPRI LAAPAALECR RHTTLQVGPA REIILGEVIG VFVRSDAVNP ANLHIDQQLM DAVGRMGGHT YARTRDQFDI KTLTPQEWEI RKIGEKLTTE
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