| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7351 |
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| Symbol | |
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| ID | 7380561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 330153 |
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| End bp | 331007 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641424 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002539721 |
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| Protein GI | 222102682 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.307061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTTT ACAGAGCAGT TGAATTTGCG TACGATTCAT CATACATATT CCACTTAGAG
AGACGAAAAC GGCTCTGCCT TCTGCGGCAG GGCATGAAAG TGGTGGATGG TGTGACCGGT
CAAGTGAAAA CACGCGCCAA GGGCGCTGGC TCCCTGGTCG CACAGGTCAG CGACAGCCTT
CGCAAGGCGA TCCTTGGCGG GGACTATGCG CCGGGCGATC GGCTTCCCAG CGAAATGGAA
CTGACCGAGG CCCATGGTGT CAGCCGAACC GTTATCCGCG AGGCAGTCAC CGGCCTGCGT
TACGATGGGC TGGTCGAGGT GCGCCAAGGG GCTGGCATTT TCGTCCTCAA TCATCATCAA
TCACGCTCAA ACCCGTCGAA GCTGGATCGC GCCCGGCTGT CCTCAGATCT AGAGGTTTTG
GAGATCCGCA CGCCGCTGGA GATAGAGGCT GCCGGGCTTG CCGCGCTGCG CCGTTCGCCT
GCGCAGGAGG AAGCGATTTT CGACTGCCAT GCAAAATTGC TGGCGTGTAT CGAGGCCGAC
CGCTCCATTC GCGAGGCCGA CCTGGCCCTG CATATGGCGA TTGCTGCGGC CACCAATAAT
CCGCTGTTTA CGCAATTTCT CGAGATGCAC GGCGCATCCG CTATCCCTCA GTCCAAAGTG
GTTGCGGAAA ACCGAGCCGC TGAGCAGACG GCCTATCGCC GCCTCATCCA CAGGGAACAC
CAGGCCGTGG TCGTGGCGAT TTCCGACGGC GACGAAAAAG CGGCCCGCGC CGCTATGCAG
GATCATCTGC GCGGCAGCCA GTTGCGCTAC CGTGATCTGT TGCGCGATCT GCGCGGTATC
GGCAGCGAGA CCTGA
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| Protein sequence | MAFYRAVEFA YDSSYIFHLE RRKRLCLLRQ GMKVVDGVTG QVKTRAKGAG SLVAQVSDSL
RKAILGGDYA PGDRLPSEME LTEAHGVSRT VIREAVTGLR YDGLVEVRQG AGIFVLNHHQ
SRSNPSKLDR ARLSSDLEVL EIRTPLEIEA AGLAALRRSP AQEEAIFDCH AKLLACIEAD
RSIREADLAL HMAIAAATNN PLFTQFLEMH GASAIPQSKV VAENRAAEQT AYRRLIHREH
QAVVVAISDG DEKAARAAMQ DHLRGSQLRY RDLLRDLRGI GSET
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