| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7339 |
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| Symbol | attR |
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| ID | 7380551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 317614 |
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| End bp | 319251 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641414 |
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| Product | transacetylase |
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| Protein accession | YP_002539711 |
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| Protein GI | 222102672 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0206236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGG ATGACCAAGT AAACGAGGAA GAGGCATCCT TGCGCCGCAA CCGGCTCAAT
ATCCTCACCT GGGAGCGGAA TGCGCAGGAT ATTGAGAGCG CAACCCATCA GGCACGCCTT
CGCCAGCTTC AGACCTATGC CGGCGCGACA TTTTCTCCGG GCGCTTATGT GGCGGAAAAG
GCTGAAATCC ATACGGATAG GCTGGTGATG GGCGCGGGCT CCTGGATTGC CGGCCATGCG
CTGGTGCGTG GCGATGTCGA GCTTGGCGAG AACGTTTCGA TCAATGCCTA TGCCTGCATG
TCTGGCAGGG TACGGGTGGG AAATGGGGTG CGGATTGCCT CGCATGTCAG CATTATCGGC
TTCAATCATG GCTTCGACGA TCTCGAAACG CCGATCTACC GCCAGCCGCT GACATCGCTC
GGCATCGAGA TTGGTGACGA TGTCTGGATT GGTGCCAATG CGGTCATTCT GGATGGCGCC
CGGATCGGCA GCGGTGCCAT TATCGCTGCT GGTGCCGTGG TCTCGAAAGA CATCCCACCA
CAGGCCATCG CTGGCGGCGT ACCGGCCCGC GTGCTGCGGA TGCGCGGCAA AGACACGGCG
TCTACCCGCA AAACCGAGGT GGTCGAGGCC GCGCTTGCCG CAATCGATGC TGCCGCTTCA
ACTGATTGGC GAGCGGTGGT GGAGCGATAT CGTATCGGCG ATGATTACAG TGCACCGGAT
GCAAGCGGCA AACCCGTTAC CAGCATTCGC CATCTCTGCG ACGCCATCGA AATTGCCGCT
GCCTTCGGTG ATATCGGCTC GATATTCGAT GTCGATGCCA CCATCGCCCG CCTGCAAGCC
GTTCAGGACC CGCAAACCGG CCTTTTCCTC GATCCTTATC GTGAAACGCA GCAGCCTCTG
CATCACGATC CAATTGCCTT GTACAATGTG CTGGCGGTTG GATATGCCCT TGAACGCCTA
GGATCAGCGC CACTCCACCT CTTCCGGTTC ATCGAACGCC TGAGTGCGAG CGATCTTGTG
CAATGGCTTG ACGGGTTGCC CTGGCAAACG CGCGCCTGGC ATTGCGGCGC GACCGTTGAC
GCCATCGCAA CTGCCGTGCA TTTCAACGGT CGTTATTTTG GCGCAGATGC CAATCGGCAC
AGTTTGTTTG GCTGGCTGAG CCTCAACTGC AATCCAGCAT CCGGCCTTTG GGGTACGGTG
ACACCAGAAG ACGGGCTGTT GCAGCCGGTC AATGGTTTTT ATCGTCTGAC GCGCGGCGCT
CATGCGCAAT TTGGCATACC GGTTCCATAC CCGAACGCCG CCATCGATTC CGTGATCGCC
AATTACCGGG CTCATGAAGG ATTTCGTGGA CAAGGCTTCA ATGCCTGCAA TCTGCTCGAC
ACGATCCACC CGCTGCTCCT TTGCCTGAAG CAGACACCTC ATCGCCGCGA CGAGGCGATG
GAAATCGCAA CTGGCATCAT TCTGCAACTG TCTACACGGT GGCAAAGTGG GCAAGGCTTC
CCGTTCGCAG ACGGTCATCC GCCCGGGTTG CAGGGAACTG AAATGTGGCT CACGACCTGT
TGGCTTTCAG CCAAACTCCT GAACCTCTCC AGCAGCCTGT CATTCAAGCC ACGAGGCATC
CATCGGTACC GAGGATGA
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| Protein sequence | MSRDDQVNEE EASLRRNRLN ILTWERNAQD IESATHQARL RQLQTYAGAT FSPGAYVAEK
AEIHTDRLVM GAGSWIAGHA LVRGDVELGE NVSINAYACM SGRVRVGNGV RIASHVSIIG
FNHGFDDLET PIYRQPLTSL GIEIGDDVWI GANAVILDGA RIGSGAIIAA GAVVSKDIPP
QAIAGGVPAR VLRMRGKDTA STRKTEVVEA ALAAIDAAAS TDWRAVVERY RIGDDYSAPD
ASGKPVTSIR HLCDAIEIAA AFGDIGSIFD VDATIARLQA VQDPQTGLFL DPYRETQQPL
HHDPIALYNV LAVGYALERL GSAPLHLFRF IERLSASDLV QWLDGLPWQT RAWHCGATVD
AIATAVHFNG RYFGADANRH SLFGWLSLNC NPASGLWGTV TPEDGLLQPV NGFYRLTRGA
HAQFGIPVPY PNAAIDSVIA NYRAHEGFRG QGFNACNLLD TIHPLLLCLK QTPHRRDEAM
EIATGIILQL STRWQSGQGF PFADGHPPGL QGTEMWLTTC WLSAKLLNLS SSLSFKPRGI
HRYRG
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