| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3288 |
|---|
| Symbol | |
|---|
| ID | 7315516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 3437447 |
|---|
| End bp | 3438745 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643618188 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_002515342 |
|---|
| Protein GI | 220936443 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA CCACCCGGAT CAGCGCAGGG GTTCTGACGG GCATCCTGCT GGGCTTCGCG
CTCAGCCTGT CCTTCGGGGT CTTCGCCAAC AAGCAGGAAA ACGAGGCCAT CCCCCTGGAG
GACCTGCGCG CCTTCACCGA CGTCTACATG CGCATCAAGC GCAACTACGT GGATTACGTG
GACGACACCA CCCTGCTCGA GAACGCCATC CGCGGCATGC TCTCCGGCCT CGATCCCCAC
TCCAGCTACC TGACCCCCAG GGACTTCCAG GACCTGCAGA TCGGCACCAG CGGCGAGTTC
GGCGGCCTGG GTCTCGAGGT GGGCATGGAG GACGGCTTCG TCAAGGTCAT CTCCCCCATC
GACGACACCC CGGCGAGCCG CGCCGGCGTG CGCGCCGGCG ACCTGATCAT CCGCCTGGAC
GACAAGCCGG TGAAGGGCAT GACCCTCAAC GAGGCGGTCA ATGAGATGCG CGGCCCCAAG
GGCACCGACA TCACCCTGAC CATCATGCGC GAGGGCGCCG ACCAGCCCAT CCGCATCACC
CTCACCCGCG ACACCATCCG GGTGCGCAGC GTGCGCAGCG AGATGCTGGA GCCCGGCTTC
GCCTACGTGC GCATCAGCAA CTTCCAGTCC CGCACCGCCC AGAACCTGGT GGAGGAGATC
AACAAGCTGC AGCGCGAGGG CAACGGCCTG CGCGGCCTGA TCCTGGACCT GCGCAACAAC
CCGGGCGGCG TGCTCAACGG TGCCGTGGGC GTCTCCGATG CCTTCCTGGA AGACGGCCTG
ATCGTCTACA CCGAGGGCCG CACCGCCGAT GCCCAGTTCC GCTACCAGGC CTCCCCGGGC
GACGTGCTCA AGGGCGCGCC CATGGTGGTG CTGGTCAACG AGGGCTCCGC CTCCGCCTCC
GAGATCGTCG CCGGTGCCCT GCAGGACCAC CAGCGCGCCG TGATCATGGG CACCCGCACC
TTCGGCAAGG GCTCGGTGCA GACCATCCTG CCGCTGCGTC AGGACACCGC GCTCAAGCTC
ACCACCGCCC GCTACTACAC CCCCGAGGGC CGCTCCATCC AGGCCGAGGG CATCGAGCCG
GACATCAAGC TCGAGCGCCT GCAGGTCAGC GCCGCGGAGA CCGACGGCTC CCGCCCGGTG
ACCGAGGCCT CCCTGCAGCG TCACCTGCAG CGCCAGCGCG CCACCGAGGA GGCCGGCGAG
CAGCCCGCCG ACAACGGCTC CCTGGCCCAG CGCGACTACC AGCTCTACGA GGCCCTCAAC
CTGCTCAAGG GGCTGACCAT TCTCCAGGCC CGCCGCTGA
|
|---|
| Protein sequence | MKSTTRISAG VLTGILLGFA LSLSFGVFAN KQENEAIPLE DLRAFTDVYM RIKRNYVDYV
DDTTLLENAI RGMLSGLDPH SSYLTPRDFQ DLQIGTSGEF GGLGLEVGME DGFVKVISPI
DDTPASRAGV RAGDLIIRLD DKPVKGMTLN EAVNEMRGPK GTDITLTIMR EGADQPIRIT
LTRDTIRVRS VRSEMLEPGF AYVRISNFQS RTAQNLVEEI NKLQREGNGL RGLILDLRNN
PGGVLNGAVG VSDAFLEDGL IVYTEGRTAD AQFRYQASPG DVLKGAPMVV LVNEGSASAS
EIVAGALQDH QRAVIMGTRT FGKGSVQTIL PLRQDTALKL TTARYYTPEG RSIQAEGIEP
DIKLERLQVS AAETDGSRPV TEASLQRHLQ RQRATEEAGE QPADNGSLAQ RDYQLYEALN
LLKGLTILQA RR
|
|---|
| |