Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2153 |
Symbol | |
ID | 7318257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2282452 |
End bp | 2284002 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643617048 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_002514220 |
Protein GI | 220935321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGCA GCGACAAGCT CATCATTTTC GACACCACCT TGCGCGACGG CGAGCAGAGT CCCGGCGCGT CCATGACCCG CGAGGAGAAG GTGCGCATCG CCAAGGCCCT GGAGAAGATG CGCGTGGACG TCATCGAGGC GGGCTTCCCC ATCGCCAGCC CCGGCGACTT CGAGTCCGTG CAGGCGGTGG CCCGCGCGGT GAAGGATTCC ACCGTGTGCG GTCTGGCCCG GGCCAAGGAC AGCGACATCG ACCGGGCCGG CGAGGCCCTG AAGGACGCCG CCTCCGCACG CATCCACACC TTCATCGCCA CCTCGCCCAT CCACATGCAG CACAAGCTGC GCATGAGCCC GGACCAGGTG CTGGAGCAGG CGGTCAAGGC GGTCAAGCGC GCCCGCCAGC ACACCGACAA CGTGGAGTTC TCCGCCGAGG ACGCCGGGCG TTCCGAGCTG GACTTCCTGT GCCGGGTGAT CGAGGCGGTG ATCGACGCCG GCGCCCGCAC CATCAACATC CCCGACACCG TGGGCTACAA CATCCCCCAG CAGTTCGGCG AGTTGATCAA GAATCTCATC GAGCGGGTGC CCAACTCCGA CAAGGCGGTG TTCTCCGTGC ACTGCCACAA CGACCTGGGC CTGGCCGTGG CCAACTCCCT GTCCGCGGTG CTCAACGGCG CCCGGCAGGT GGAGTGCACC ATCAACGGCC TGGGCGAGCG GGCGGGCAAT GCTTCGCTCG AGGAGATCGT CATGGCGGTG CGCACCCGCC AGGACGTGTT CTCCTGCAAC ACGACGCTCG ACACCACCCA GATCGTGCCC TGCTCGCGCC TGGTCTCCGG CATCACCGGT TTCCCGGTGC AGCCCAACAA GGCCATCGTG GGGGCGAACG CCTTCGCCCA TGAGTCCGGC ATCCACCAGG ACGGCGTGCT CAAGCACCGC GACACCTACG AAATCATGCG CGCCCAGGAC GTGGGCTGGT CCGACAACCG CATCGTGCTG GGCAAGCACT CCGGCCGCAA CGCCTTCAAG ACCCGACTCA AGGACCTGGG CATCGAGTTC GAGTCCGAGG AGGAGTTGAA CGAGGCCTTC GCCCGGTTCA AGGATCTGGC CGACCGCAAG CACGAGATCT TTGATGAGGA TCTCCAGGCC CTGGTGACCG AGACCGCCAC CGCCATGGAG GACGAGACCT ACAAGCTGGT GGCGCTCAAG GTCTGTTCCG AGACCGGCGA GACTCCGGTG GCCTCGGTGA CCCTGAACGT CAATGGCGAG GAGAAGAGCG GCACTGCCGA GGGCGGTGGC CCCGTGGATG CGGCCTTCAA GGCCATCGAA TCCATCGCGC CGAGCGGCAC CGAGCTGCAG CTCTATTCGG TGAACAACAT CACCAGCGGC ACCGACGCCC AGGGCGAGGT GACCGTGCGC CTGGAGAAGG CGGGCCGGGT GGTCAACGGC CAGGGTGCCG ATACGGACAT CGTCATCGCC TCGGCCAAGG CCTATCTCAA TGCCCTTAAC CGGCTGACCA ATCCTCCCGG CCGGGCCCAT CCCCAGCGTG GCGACGTCTG A
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Protein sequence | MSGSDKLIIF DTTLRDGEQS PGASMTREEK VRIAKALEKM RVDVIEAGFP IASPGDFESV QAVARAVKDS TVCGLARAKD SDIDRAGEAL KDAASARIHT FIATSPIHMQ HKLRMSPDQV LEQAVKAVKR ARQHTDNVEF SAEDAGRSEL DFLCRVIEAV IDAGARTINI PDTVGYNIPQ QFGELIKNLI ERVPNSDKAV FSVHCHNDLG LAVANSLSAV LNGARQVECT INGLGERAGN ASLEEIVMAV RTRQDVFSCN TTLDTTQIVP CSRLVSGITG FPVQPNKAIV GANAFAHESG IHQDGVLKHR DTYEIMRAQD VGWSDNRIVL GKHSGRNAFK TRLKDLGIEF ESEEELNEAF ARFKDLADRK HEIFDEDLQA LVTETATAME DETYKLVALK VCSETGETPV ASVTLNVNGE EKSGTAEGGG PVDAAFKAIE SIAPSGTELQ LYSVNNITSG TDAQGEVTVR LEKAGRVVNG QGADTDIVIA SAKAYLNALN RLTNPPGRAH PQRGDV
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