Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1226 |
Symbol | |
ID | 7315478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1314313 |
End bp | 1316226 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643616114 |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_002513299 |
Protein GI | 220934400 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.548532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCGGG GTGCCGTCAT GAGTAGCGGC GTCCTGGGTA TCGGCGTGTC CGGCCTGCTG GCCTTCCAGC GGGCGCTCGG TGTCACCGGC AACAACATCG CCAACTCCGC CACCGAGGGT TACAGCCGCC AGCGCATCGA TCTCAGCACC CAGATCCCGC AGTTCGCCGG CAATGGCTAC TTTGGCAGCG GCGTACAGGT GTCGGGAGTG AATCGAATCT TCGACCAGTT CGTGGAGACC CAGCTGCGCA ACAGCACCTC CGCGAGCGAG CAGTATGCCC TCTATTACGA TTTTGCCCGC CGGGTGGACA ATCTGTTGGC AGATCCCGAC TCGGGTCTGG CACCGGGTCT TCAGCAGTTC TTTGCCGCCG TGCAGGACGT GGCCAACGAC CCGACCTCCA ATGCTGCCCG GCAGGTGCTG ATCTCCGAGG CGGAATCCCT GGTGGATCGC TTCAGCTTCC TCAATCAGCG CCTGGAGGAG CAGCGCAATC TGGTCAATGG CCAGATCCAG ACCACGGTGG CGGAGATCAA CAGCCTGGCT GAAGCCATTG CCGATCTGAA CGAGGACATC GTCTCCGCCC TGGGCCGGGG TGGCGGGGCG CCGCCCAACG ACCTCCTGGA CCAGCGTGAC CGGCTGGTGC TGCAACTCTC CGAGCTGGTG TCCGTGAACA CCATCGAGCA GGACGACGGC GCCCTCAATG TCTTCATCGG CAATGGCCAG AACCTGGTGC TGGGCAACCG GCCCACGGTG CTGGTCGCCG ATGGCCTGGG TCCGGACCCG GCCCAGATGC AGGTCGGCTA TGTGAGCCCC GGCGCCACGG TGGACATCAC CTCCTACATG ACCGGTGGCC GGCTCGGTGC ACTGCTGGAC CTGCGCACCT CGGTCCTGGA CGTGGCGCAG AACTCCCTGG GACGCACCGC CATCGGCCTG GCCCAGGCTT TCAATGATCA ACATGTCCTG GGGCAGGATC TCAACGGTCA GCTCGGCGAG GCCTTCTTCC GTGTCCCCGC GCCAGAGGCC ATCGCCGGCG CGAGCAATGC CGCCACCGGT GATCTCCAGG TGGAGATCCA GGACTACTCG GCGCTCACAC TGAGCGACTA TCGCCTGCGT TTCGACGGCG CGGACTGGCA GCTGCGCCGG GAGCCGGGTG GTCAGCTGCT GGGTGCGGTC GCACCCGGTG GCACGCTGCT GATCGAGGGG CTCAGTATCG ACACCTCGGG CATCGCGGGT GCTGCCACCG GTGACACCTT CCTCATTCGG CCCACCCGAG GTGGTGCCAA CCAGATCGAT ACCGTGATCA GCGACCCGCG CATGGTCGCC GCGGCCTCGC CCGTGCGTGC CAGCCCGGAC GGGGACAACA CGGGGCCTGC GATCGTGCGC TCGGTGATTG CCGTGGATCG TGACGCCCTG GATCTCACGC CGGTCACGGT GACCTACAAT GCCGGTGCCT CCCAGTTCGA GATCGGCGGG GACACCTATC CCCTGGACCC GTCCGGTGTG ACCGTCATCA ACCACAACGG CTGGGAGCTC ACCATCGAAG GGGTGCCCGA TGACGGTGAC GCATTCCAGG TGGGTCCGAA CATCGGCGGG GTAGGCGACA ACCGCAACGC CCTGGCACTG GCCGGGCTTC AGGACCAACG CATGATGGTC GGCGGTACCG CCACCCTCGA AGGCACCTAC AACACCCTGG TGGCGGAGGT GGGCACCCGC ACCCGACAGG CCGAGATTGC CGCCCGCGCC CAGGTCAAGC TGCTGGACGA GGCCAGGGCC CAGCGGGAGT CCATCTCCGG GGTGAACCTG GACGAGGAGG CGGCCAACCT GCTGCGCTAT CAGCAGGCCT ACCAGGCGGC CGCACAGGTC ATCTCGGTGA CCAACTCCCT GTTCGACACC CTGATCAATG CCGTGAGGCG TTAG
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Protein sequence | MFRGAVMSSG VLGIGVSGLL AFQRALGVTG NNIANSATEG YSRQRIDLST QIPQFAGNGY FGSGVQVSGV NRIFDQFVET QLRNSTSASE QYALYYDFAR RVDNLLADPD SGLAPGLQQF FAAVQDVAND PTSNAARQVL ISEAESLVDR FSFLNQRLEE QRNLVNGQIQ TTVAEINSLA EAIADLNEDI VSALGRGGGA PPNDLLDQRD RLVLQLSELV SVNTIEQDDG ALNVFIGNGQ NLVLGNRPTV LVADGLGPDP AQMQVGYVSP GATVDITSYM TGGRLGALLD LRTSVLDVAQ NSLGRTAIGL AQAFNDQHVL GQDLNGQLGE AFFRVPAPEA IAGASNAATG DLQVEIQDYS ALTLSDYRLR FDGADWQLRR EPGGQLLGAV APGGTLLIEG LSIDTSGIAG AATGDTFLIR PTRGGANQID TVISDPRMVA AASPVRASPD GDNTGPAIVR SVIAVDRDAL DLTPVTVTYN AGASQFEIGG DTYPLDPSGV TVINHNGWEL TIEGVPDDGD AFQVGPNIGG VGDNRNALAL AGLQDQRMMV GGTATLEGTY NTLVAEVGTR TRQAEIAARA QVKLLDEARA QRESISGVNL DEEAANLLRY QQAYQAAAQV ISVTNSLFDT LINAVRR
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