| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0459 |
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| Symbol | |
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| ID | 7316545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 489521 |
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| End bp | 490615 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643615343 |
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| Product | twitching motility protein |
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| Protein accession | YP_002512544 |
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| Protein GI | 220933645 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0174567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCA TCAACGCATT CCTGAAGCTG GGCCGCGAGC AGGGTTGTTC GGACCTTCAC
CTGGCGGTGG GTGTGCCACC CATGCTGCGC ATGAATGGGG ACCTGATGCC CATCAAGTTC
CGAGATCTGG GCGAGCGGGA GTTGGAGGCC TACGTGCTGG AAATCCTCAC GCCGACTCAG
CGCAAGCGTT TCCGTGATGG CGAAGACCTG GACTTCTCCT ACGTGGCCGA AGAGGTGGGT
CGTTTCCGGG TCAATCTGTT CCGCAAGGCC ACCGGGGTGG GTGCCACCTT TCGTCACGTG
CCTGCCACCG TGCCCCAGCT GGATGAGCTG GGTCTGCCGT CGGTGGTGCA TGAACTCATC
GAGCATCATC AGGGCATGGT GCTGGTCACC GGCTCCACCG GCACCGGCAA GTCCACCACG
TTGGCCGCCA TCATTGACCA CATCAACAAC CGCCGGGCTG TGAACATCCT GAGCCTGGAG
GATCCCATCG AGTTCGTGCA TCACAGCAAG AAGGCCCAGG TCATCCAGCG GGAAGTGGGA
ACCCACGTGC AGAGCTACGC CGATGGCCTG CGCGCGGCGC TGCGTGAGGA CCCTGATGTG
ATACTGGTGG GCGAGCTGCG CGATTCGGAA TCCATTACCA TGGCCATGAT TGCCGCCGAG
ACCGGTCACC TGGTGCTCGG AACCCTGCAC ACCACGTCTG CAGTGAAGAC CATCGACCGC
ATTCTCGACG CCATCCCCAT CGAATTGCGC GAGCAGGGCA AGACCTTCCT GTCCCAGAAC
CTCCATGGTG TGCTCACCCA GAACCTGGTC AAGAAGGCGG ATGGGCGAGG TCGCCAGGCC
GTGGTGGAGT CTCTGGTGGT CACCCGGGCC ATCGCCAAGA TGATCATGAC CGACAAGGTG
CACCAGATCC CCTCCCAGAT GCAGACCGGG CGAGACCGGG GTATGCAGTT GTTGGATCAG
GCGCTCATGG AGGCCCTGGA GAAAAAGCTC ATCGATCCCG ATGACGCTTA CCTGCATGCC
AACGACAAGA AGGCCTTCCA GCGTTTTGTC ACCGATGCCT CGTTGCTCCC CAAGATCAAC
CTGGCGGGCG GATAA
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| Protein sequence | MARINAFLKL GREQGCSDLH LAVGVPPMLR MNGDLMPIKF RDLGERELEA YVLEILTPTQ
RKRFRDGEDL DFSYVAEEVG RFRVNLFRKA TGVGATFRHV PATVPQLDEL GLPSVVHELI
EHHQGMVLVT GSTGTGKSTT LAAIIDHINN RRAVNILSLE DPIEFVHHSK KAQVIQREVG
THVQSYADGL RAALREDPDV ILVGELRDSE SITMAMIAAE TGHLVLGTLH TTSAVKTIDR
ILDAIPIELR EQGKTFLSQN LHGVLTQNLV KKADGRGRQA VVESLVVTRA IAKMIMTDKV
HQIPSQMQTG RDRGMQLLDQ ALMEALEKKL IDPDDAYLHA NDKKAFQRFV TDASLLPKIN
LAGG
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