| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0297 |
|---|
| Symbol | |
|---|
| ID | 7316273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 336350 |
|---|
| End bp | 337675 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643615182 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002512383 |
|---|
| Protein GI | 220933484 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2270] Permeases of the major facilitator superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.321668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCG CGTCGCGGAA AGAGATCTTC GGCTGGGCGA TGTTCGACTT CGCCAATCAG
GCCTACACCC TGCTCATCAT CACCGTGGTG TTCGGCGATC TGTTCACCCG GGTGATCGTG
GGCGACGCGG ATCAGGGCTA CCGGCTGGGC AATCTGTTGT GGAGCGTGGC GCTGGCGATC
AGTTATCTCG CGGTGGTGAT CGCCGGCCCG GTGTGCGGCG CCATCATGGA CTTCTCCGCC
GCCCGCAAGC GCTTCCTGTT CGCCAGCTAC CTGATGACTG TGGTCACCAC GGCGCTGCTG
TATTTCGTCG CCCCGGGCTA CATCTGGCTG GGCATGCTGC TCATCATCCT GTCCAACTTC
GCCTACGCCA TCGGCGAATC CTTCATCGCC AGTTTTCTGC CCGACCTGGG CCCGCCGGAG
AGCCTGGGCT GGATCTCCGG CTTCGGCTGG GCCCTGGGCT ACGTGGGCGG TCTGGTGTCC
ACCGCCTTCG CGCTGCTGTT CCTGGGCGAG GTCAGCCTGG AGAACTTCGA CAACGTGCGC
TGGGTGGGGC CCTTCGCCGC AGGCTTCTTC CTGGTGACCG CCATCCCCAC CTTCCTCTGG
CTCCAGGAAC GGGGTCGCCG TCGGCGCCTG GCGCGGGGTG CAAGTTATCT CTGGCTGGGG
CTGCGCCGGG TACAGGCCAC CCTGGCCACC GTGGGCAGTC ACCGGGATCT GGCCTGGCTG
CTGGTGTCGG TGTTCTTCGC CATGGCGGGC ATCTACATCA TCATCTCCTT CACCTTCATC
TACGGCGCCC AGGTGGTGGG TTGGGACGAG CAGACCCGGG TGATCATGTT CGTGGTGGTG
CAGCTCACCG CTGCCGCCGG CGCCCTGGGC TTCGGCTATC TGCAGGACCA CATCGGCGCC
AAGCTCACCT ACGGGATCAG CCTCACGCTC TGGCTGCTGG CGGTGCTGCT GATCTTCGGC
ACACCGCAGA TCGCCCACTG GCTCACGGCC GTGACCGGCA GCAGCGTCGA GCCCCAGCAG
GTGTTCCTGG TGGTCGGTTC GGTGGCGGGC CTGTGCCTGG GCTCCGTGCA GTCCGCCGGA
CGCGCCCTGG TGGGCCAGTT CGCGCCCCGG CTCAAGGCGG CGGAGTTCTT CGGTTTCTGG
GGGCTGTCCA GCAAGCTGGC GGCCATCGTC GGACTGCTGG GCATCGGCGT GCTGCAGGCC
TGGGTGGGTC TGCAGGCGGC GATCCTGCTG TGTCTGCTAC TCTTTGCCCT GGCCCTGGTG
GCCATTCTGC CCATCAACGA GGCTCGCGGG CGGGCCGCCG CCCTCGCCAG GCCGCGGCCG
GCCTGA
|
|---|
| Protein sequence | MQRASRKEIF GWAMFDFANQ AYTLLIITVV FGDLFTRVIV GDADQGYRLG NLLWSVALAI
SYLAVVIAGP VCGAIMDFSA ARKRFLFASY LMTVVTTALL YFVAPGYIWL GMLLIILSNF
AYAIGESFIA SFLPDLGPPE SLGWISGFGW ALGYVGGLVS TAFALLFLGE VSLENFDNVR
WVGPFAAGFF LVTAIPTFLW LQERGRRRRL ARGASYLWLG LRRVQATLAT VGSHRDLAWL
LVSVFFAMAG IYIIISFTFI YGAQVVGWDE QTRVIMFVVV QLTAAAGALG FGYLQDHIGA
KLTYGISLTL WLLAVLLIFG TPQIAHWLTA VTGSSVEPQQ VFLVVGSVAG LCLGSVQSAG
RALVGQFAPR LKAAEFFGFW GLSSKLAAIV GLLGIGVLQA WVGLQAAILL CLLLFALALV
AILPINEARG RAAALARPRP A
|
|---|
| |