| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_20520 |
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| Symbol | |
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| ID | 7314376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2215698 |
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| End bp | 2216951 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643612496 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002509792 |
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| Protein GI | 220932884 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.561553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA GGGTATTAAT GGTTTTGAGC CTGGTCCTGG TATTGTTGGT TTCTCTGTCC
ACTGTTTCTA TGGCTAAAAA AGTCTTAACT ATTAACAGTT ATATCAGTGA CCCTGTCCCC
AAAGAAGCTT TTGAAGATGT TATTAAGGCC TTTGAAGAAG CACACCCTGA TATTGATGTC
CGGGTAAGTA CTACTGCTCA TGAAGATTTT AAAAAGGCCC TGAGGATCTG GTTAAGTTCT
GATAATCCAC CAGATGTCAT CACCTGGTTT GCCGGTAACA GGGCAAAATA TTTTATTAAC
AAGGGTTTAA TTATGGCTAT AACTGATGTC TGGGAAGAAG CGGATCTTTA CAATAAATTC
CCCCGGGCTT TCAGGAGTAT AAGTTTTGTT AATGGAAAAG CTTATTTCCT TCCTTATAAC
TGGTACTGGT GGGGAATGTT TTACCGTAAG TCCATCTTTG ATAAGTATGG GCTTGAAGAA
CCCCGGACCT GGGATGAATT TTTAGATGTC TGTGAAACCC TCAAACAAAA CGGTATTACT
CCGATAACAA TCGGGACCAA ATACCGCTGG ACTGCTACTG GGTGGTTTGA TTATCTCAAC
ATGAGGGTTA ATGGGCCCGA ATTTCATATC AGGTTGATGG AAGGTAAAGA GAAATATAAT
GATCCCCGGG TTAAGAAGGT ATTTGAGTAC TGGCGTCAGT TACTGGATAG GGGATATTTT
GTTGACAATG CGGCTGCCTA TTCCTGGCAG GAAGGTGTAA GGTTTATGGT TAAGGGAGAA
GCTGCAATGT ACTTGATGGG TCAGTTTATT CTGGATGCTG TTCCTGAGGA GGTAGCTAAA
GACCTTGACT TTTTCCGCTT CCCTATAATT AATGAAGATG TACCTATTGG GGAAGATACT
CCTACTGATG GGTTTATGAT TCCTAAGAAA GCTAAAAACC CGGAACTTGC TAAAGAATTC
CTCAAGTTCC TGGCTTCCAG AGAAGGGCAG ATGATCTTTA TAGAAAAAAC AGGCCGTATC
GGGGTTAATA ATGAAATTCC AATGGATTCC TACCCGCCTC TAACCCAGAA GGGTGTTAAG
ATGATTCAGG GAACCGATGC CCTGGCCCAG TTCTATGACA GGGATACACC TCCAACTATG
GCTGATAAAG GTATGAACGG ATTAATGAAT TTCTGGGCAT ACCCTGATCA GATAGATAAA
ATTCTTGATA ACCTTGAAAG GCAGAGACAG ATGATTTTTT CAGAACAGGA ATAA
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| Protein sequence | MSKRVLMVLS LVLVLLVSLS TVSMAKKVLT INSYISDPVP KEAFEDVIKA FEEAHPDIDV
RVSTTAHEDF KKALRIWLSS DNPPDVITWF AGNRAKYFIN KGLIMAITDV WEEADLYNKF
PRAFRSISFV NGKAYFLPYN WYWWGMFYRK SIFDKYGLEE PRTWDEFLDV CETLKQNGIT
PITIGTKYRW TATGWFDYLN MRVNGPEFHI RLMEGKEKYN DPRVKKVFEY WRQLLDRGYF
VDNAAAYSWQ EGVRFMVKGE AAMYLMGQFI LDAVPEEVAK DLDFFRFPII NEDVPIGEDT
PTDGFMIPKK AKNPELAKEF LKFLASREGQ MIFIEKTGRI GVNNEIPMDS YPPLTQKGVK
MIQGTDALAQ FYDRDTPPTM ADKGMNGLMN FWAYPDQIDK ILDNLERQRQ MIFSEQE
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