Gene Hore_11060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11060 
Symbol 
ID7312848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1200368 
End bp1201087 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content35% 
IMG OID643611542 
ProductRadical SAM domain protein 
Protein accessionYP_002508854 
Protein GI220931946 
COG category[C] Energy production and conversion 
COG ID[COG0731] Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00221485 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA AATATATTTT TGGACCGGTT TTATCGAGAA GACTGGGAAA ATCCCTTGGA 
ATTGATTTAA TTCCCTTTAA AACCTGTTCC CTGGACTGTG TTTACTGTGA ATGTGGTAAA
ACAGATAAAC TGACCCTGGA GAGGAAAGAG TATGTACCGA CTGAGGAGGT AATTAATGAA
CTAAAAAAAT ATCTGTATAA CAGACCGAAG TTAGATTATA TTACCTTTTC CGGTTCTGGA
GAGCCGACCC TTCATAAGGG TATCGGAGAA ATTATTTCTT TTTTAAAAGA TAATTATCCC
GAATATAAGG TGGCCCTACT GACCAATAGC ACTCTTTTAT ACCGTAATCA GGTTATTTCA
GAAATTAAAG GGTGTGATTT GATTGTACCT TCATTAGATG CTGTATCAGA AGAGATATTC
CAAAAAATAA ATAGACCTGT GTCTGGTTTG AATGCAGAAT TAATAGTAAA GGGTTTGATA
AACCTCAGGA AAAACTATAA CGGTAAAATG TGGCTGGAAA TATTCATAAT TCCGGATTTG
AATGATAATA AAAAGGAGTT AATGCTATTC AAGGAAGCAA TTAATAGAAT AAAACCCGAT
AAGATTCAGT TAAATGTCCT GGACCGACCA GGAACAGAAA ATTGGGTAAA ACGTATACCA
GAAGAAAGGC TTATGGAAAT AGCTGAATAC CTGGGTGATA ATGTAGAGGT TATTACTTAA
 
Protein sequence
MKLKYIFGPV LSRRLGKSLG IDLIPFKTCS LDCVYCECGK TDKLTLERKE YVPTEEVINE 
LKKYLYNRPK LDYITFSGSG EPTLHKGIGE IISFLKDNYP EYKVALLTNS TLLYRNQVIS
EIKGCDLIVP SLDAVSEEIF QKINRPVSGL NAELIVKGLI NLRKNYNGKM WLEIFIIPDL
NDNKKELMLF KEAINRIKPD KIQLNVLDRP GTENWVKRIP EERLMEIAEY LGDNVEVIT