| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09560 |
|---|
| Symbol | |
|---|
| ID | 7313449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1032940 |
|---|
| End bp | 1033908 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643611395 |
|---|
| Product | Monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_002508707 |
|---|
| Protein GI | 220931799 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.785729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTGATA ATGGTGTCAA TGAAACCCAA ATGAGTTTTT TTAAGAGGTT TTCTGAGAAG
ATTATTCCTT TTACTGGATT ATTGATAATT TGTATAATAC TTTCTATTGC ATCACCCTAT
TTTCTTACCT TAACTAATAT TATGGCTATA GGTATTCAGA CTACAGTTAT TGCCATATTA
GGTATAGGTG TTACGTTTGT AATAATTACT GCTGGAATAG ATTTATCTGT GGGGTCAGTA
CTAGGATTAG CAGGAGTAAT AACTACCATA AGTATGGCTA ATGGAATCAA TATGTATTTA
TCTATTATTT TTGGATTATT GGTTGGTGCA GCAATAGGTT TTGTTAATGG TCTAGTGACG
ACCAAGGGTA AGATCCATTC TTTTATCGCA ACTTTAGGTA TGATGGGTAT TGCCAGGGGA
TTAGCATTAA TAATTACAGG AGGTATTCCA GTCTCAGGTT TACCAAGTGA ATTTGATTTT
ATGGGAGCAG GAAAAATATT TGGTTTTTTT CCAGTACCGG TTTTTATTTT AATTATTGTT
GCTATAATAG CACATTTAAT TTTATCGAAG ACAAGAATAG GAAGATATAC ATATGCAATA
GGTAGTAACG CAGAAGCAAC TCGCCTGTCA GGTGTTAAAG TTGATAAATA TTTAATAATT
GTTTTTACTA TATCAGGGTT GATGGCATCA TTAGGTGGCA TAGTTCAGGC CTCTAGATTA
GTAACCGGAC AGCCTACTGC TGGAACAGGT TATGAGTTAG ATGCTATTGC TGCTGCAGTA
ATCGGTGGAA CAAGTTTATT GGGTGGAGAA GGAAGTATTT TAGGTACAAT AATTGGAGCC
CTAATTATGG GTGTGCTAAG AAATGGTGCT AATTTATTAA ATATATCTGA ATTTATTCAA
CAGGTTTTAA TTGGGATAAT TATAATTTCA GCTGTTATTT ATGATAGACA CCGCCGTAGT
AAGAATTAA
|
|---|
| Protein sequence | MIDNGVNETQ MSFFKRFSEK IIPFTGLLII CIILSIASPY FLTLTNIMAI GIQTTVIAIL
GIGVTFVIIT AGIDLSVGSV LGLAGVITTI SMANGINMYL SIIFGLLVGA AIGFVNGLVT
TKGKIHSFIA TLGMMGIARG LALIITGGIP VSGLPSEFDF MGAGKIFGFF PVPVFILIIV
AIIAHLILSK TRIGRYTYAI GSNAEATRLS GVKVDKYLII VFTISGLMAS LGGIVQASRL
VTGQPTAGTG YELDAIAAAV IGGTSLLGGE GSILGTIIGA LIMGVLRNGA NLLNISEFIQ
QVLIGIIIIS AVIYDRHRRS KN
|
|---|
| |