Gene Hore_06300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06300 
Symbol 
ID7314535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp679456 
End bp679860 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content36% 
IMG OID643611060 
ProductNusB antitermination factor 
Protein accessionYP_002508382 
Protein GI220931474 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000202636 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA CACGACACCA GGAGAGGGTC TGGGCTTTAC AGATTTTATA TAGTTTAGAT 
ATTTCCAGTG AATTAAATAT ACAAAAGGCC AGAAAAACCT GTCGGGAATT TAAATATAAA
AAGGTACTCG ATAAAAAGCG GTATTATTTT GAAGATATTG TTGAGGGAGT CATAAATTCC
CGGCAGGATC TTGATTCTAT CATTAATAAA TATGCTATCG ACTGGGATGT TGAAAGGATG
GCCTGTATTG ATCGTAATAT ATTACGGATA GCTTTATATG AAATTGAATC AGGTCTACCG
GTGGGAGTAG CTATTGATGA AGCCGTGGAA ATTGCCAAGG ATTTTGGTGA CAGTAATTCT
CCGAAATTTA TAAATGGTAT TCTCGCAAAA AGTATCGAGG ATTGA
 
Protein sequence
MKITRHQERV WALQILYSLD ISSELNIQKA RKTCREFKYK KVLDKKRYYF EDIVEGVINS 
RQDLDSIINK YAIDWDVERM ACIDRNILRI ALYEIESGLP VGVAIDEAVE IAKDFGDSNS
PKFINGILAK SIED