Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_06030 |
Symbol | |
ID | 7314508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 656041 |
End bp | 657591 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643611033 |
Product | prepilin-type N-terminal cleavage/methylation domain protein |
Protein accession | YP_002508355 |
Protein GI | 220931447 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAT TAAAAAAAGA GAGAGGGTTA TCCTTAATAG AAGTGATGGT TTCCCTGGTT ATATTTGCGG TAATTGTTCT TGCTTTTGGT TCCTTTATTA CCTCAAATTA TAAAGGTATC CAGGAGGCCG GAGAAATGAC CAGGTCAGCC CATGAAAATA AAAAGACAGT AGAGAGAATG ATTGCTTCAG GACAGGTCTC CCGGGGACAT TCTTTAGAGC TTGACTTCGG GGAAGACAAT ATTGTGATAG ATGGTGGTAT AGCTGAATCG GGGAAACTAA GAACATTTAT TCCCACGGTC CCGGCCATTG TCAGTGTTAC TTCAGACCCT GAGTTTCATG TAATGGGTGA AGGACCGGTA ATTATCGAGG TTGTGGTTAC TACCAGAATG GTACCTGATG ACACCGCGGT TGAAGTTGAG TTGCGAACCC CTGACGATAT ACTGGTTGAT ACTGCAGTGG GGCAAATTCA GGATAACCAG GATACTCTTT ATCTTAATGC TGGGGAACAT CTCTCAGATG GCATTTATAA TATTGTAACC AGGGTAGATG GTATCTGGTC TCCTTTTGTT ATTAATTATG TCATCAGGCC CATTGTTTAT GTAGTGGTAG GGGAGGATAG CACCGTTCTC TGCTCAAATG ATGGGGAAAA CTGGACAGAC CACAGTGAAG AGTTGCCGGT AGATGGTGTT GATTTAAATG CTATTATCTG GGGTGGACGT CCTGATGACC GGAAATTTAT TATAGTCGGG GATGATGGTT ATATATTTAC CTCGGAGGAC GGGGTTAACT GGCAGGAGGA AATAACTCCT ACTGGTTCGG ACCTCTATGA TATTTGCTGG GCTAAAGAAA GGTATCTCGC CGTGGGTGAA GGGGGTATAA TTCTTACTTC CGACAGTGGT ACTGACTGGA ATAAGATATC TTTTGATGAT AATGTTAACC TCTATGGGGT TACATATGGT GGTACTTCAG AAGATAGCTT TTCAGTAGCA GTTCCGGAGG CAACTCCGAA TTATACTGTT GTTAAAATTG AAGGGGAAGA CCCTACCAAA AAAAATCTGA CACCATCAGA TAATCTTTAC AGTGCTACCT GGGGAAGTCT ACCCTCCAGT GGAGAAGGAG TGTTTATGGC TGCCGGTGTC CAGGATATTA TCAGTTTTGA TCATAATATT AAACTATTGA CCGATAATGG TTATTATAAT GAGGATTATA TTTTCAATGA TATTGTTCCG GCTTTAATAG CAGAGACCAG TACTTTTCTG GCAGCCGGTT CTGATGGGAA AGATGGTGTA ATTATGATAT TAAGGAAAGT GGATAGTGGT GGACTTATCT GGGATTACCT GCATAATGTT GACGAGCTTC CTGAAATCCC CTCAAATCTG GCAGGTTTTG ATGCAATAGT CTGGTTTAAT GATAGATTAG TAGCCACCGG TGTTAATAAA AGCGGGAGAG AAGTAATTAT TAATCTCCAT TATAACGGGG ATAGCTGGGA ATGGCAGGAT GTTTATACCG GTAGTGGGTA TGTGAGACTA AATGATGTGG TGGCCCGGTA G
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Protein sequence | MKLLKKERGL SLIEVMVSLV IFAVIVLAFG SFITSNYKGI QEAGEMTRSA HENKKTVERM IASGQVSRGH SLELDFGEDN IVIDGGIAES GKLRTFIPTV PAIVSVTSDP EFHVMGEGPV IIEVVVTTRM VPDDTAVEVE LRTPDDILVD TAVGQIQDNQ DTLYLNAGEH LSDGIYNIVT RVDGIWSPFV INYVIRPIVY VVVGEDSTVL CSNDGENWTD HSEELPVDGV DLNAIIWGGR PDDRKFIIVG DDGYIFTSED GVNWQEEITP TGSDLYDICW AKERYLAVGE GGIILTSDSG TDWNKISFDD NVNLYGVTYG GTSEDSFSVA VPEATPNYTV VKIEGEDPTK KNLTPSDNLY SATWGSLPSS GEGVFMAAGV QDIISFDHNI KLLTDNGYYN EDYIFNDIVP ALIAETSTFL AAGSDGKDGV IMILRKVDSG GLIWDYLHNV DELPEIPSNL AGFDAIVWFN DRLVATGVNK SGREVIINLH YNGDSWEWQD VYTGSGYVRL NDVVAR
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