Gene Hore_05580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05580 
Symbol 
ID7313530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp607292 
End bp609232 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content40% 
IMG OID643610988 
ProductThreonyl-tRNA synthetase 
Protein accessionYP_002508310 
Protein GI220931402 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000588041 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA TTAAAGTAAC ATTACCAGAT GGTTCAGTAA GAGAATATGA CCCGGGTGTT 
ACTATTGAAG AAGTTGCTTA CAGTATAGGT AAGGGATTGG GCCGGGCTGC TGTTGCCGGT
AACGTTGATG ATAAACTGGT GGATCTGGAT ACAACATTAG TAAATGATGC CCGTATTTCT
ATTGTTACTA TTGACTCTGA AGAGGGTCTG GATATTTACC GGCATACTAC TGCTCATATC
CTGGCCCAGG CTGTAAAGAG GTTGTATAAG AACGTAAAAC TGGGTATAGG GCCAACTATC
GAAAACGGAT TTTATTATGA TTTTGATGTT GAAGAAAGTT TTTCACCATC AGATCTGGAA
AAAATTGAAA AGGAAATGGA AAAGATTATT AAAGAAGATT TGCCCATTAA AAAAGAAATG
GTTTCCAGAG ATGAAGCCCT TAAATTAATG AAAGAGAAGG GAGAAATTTA TAAAGTTGAA
TTAATTGAAG AACTGGAAGA TGATTATGTC AGTTTATACC ACCAGGGTGA ATTTATCGAC
CTTTGCCGTG GTCCCCATTT ACCATCAACC GGTAAAGTTA AGGCCTTTAA ACTTCTCAAT
GCTGCCGGGG CTTACTGGCG TGGTGATGAA AATAATAAGA TGTTACAGCG TATTTACGGA
ACCGCTTTTC AGAAGAAAAA ACAGCTTGAA GAACACCTGA AAATGCTAGA AGAAGCCAAA
AAACGTGACC ATAATAAATT AGGGCGGGAA CTGGATCTTT TCATGACAGA GGAATCAATT
GGCCAGGGTT TACCCCTGTT AAAACCAAAA GGAGCCAAGG TGGTTCAGAT TTTGCAGCGG
TTTGTTGAAG ATGAAGAGGA GAAAAGGGGT TATCAGTTGA CCAAAACTCC ATATATGGCC
AAAAGTGATC TTTACAAGAT ATCAGGCCAC TGGGACCATT ACAAAGAAGA TATGTTTATC
CTCGGTGATG AAGAAAAAGA TGATGAAGTA CTGGCCCTGC GTCCGATGAC CTGCCCCTTC
CAGTTTATGA TATATAATTC AAAACTGAGG AGTTATCGTG ACCTGCCCCT GAGGTATTCT
GAAACCTCAA CCCTGTTCAG GAATGAGGCC TCAGGAGAAA TGCATGGTTT GATTAGAGTG
CGTCAGTTTA CAATTTCGGA AGGCCATATC ATCTGTACTC CAGAACAGTT AGAAGAGGAG
TTCAGGGGTG TAGTTAATCT TATTAATTAT ATGATGGAGA CTCTGGGAAT TGAAGATGAT
ATCTGGTACC GCTTTTCTAA GTGGGACCCC GATAATAGAG AAAAATATAT AGATAATCCC
ACTGCCTGGG AAGAATCACA GGATAAGATG AAGAACATTT TAGATAAACT AAATATAGAT
TATGTTGAGG CTGAAGGAGA GGCAGCGTTT TATGGACCAA AACTTGATAT TCAGTTCCGG
AATGTACACG GAAAAGAAGA TACTATAATT ACCGTTCAGA TAGATTTCGC CCTGCCAGAA
AGATTTGATA TGACCTACAT TGATAAGGAT AACAAAAAGA AACGCCCCTA TGTTATTCAC
CGGACTTCAG TCGGTTGTTA TGAAAGAACA CTGGCCATGT TGATTGAGAA ATATGCCGGT
GCTTTTCCAA CATGGCTTGC CCCTGTTCAG GTTGAAATAA TTCCTGTTTC CGATGATCAG
GTAGATTATG CTTATGAGGT CAAGGGAATT CTTAAGGAAG CAGGTATCAG GGTCGAGGTA
GATGATACCA ATGAAAAACT GGGGTATAAA ATACGCCAGG CCCAGATGGA AAAAATACCC
TATATGTTAA TTGTCGGGAA CAGAGAAGTT GAAAATAGAA CTGTTTCGGT TCGTGATAGA
AAGGAAGGAG ATCTCGGGGC AATAAGTATT AAAGAATTTA AGGAGAAAAT AGTCAGGGAG
GTTGAAGAAA AGAGTCATTA A
 
Protein sequence
MEKIKVTLPD GSVREYDPGV TIEEVAYSIG KGLGRAAVAG NVDDKLVDLD TTLVNDARIS 
IVTIDSEEGL DIYRHTTAHI LAQAVKRLYK NVKLGIGPTI ENGFYYDFDV EESFSPSDLE
KIEKEMEKII KEDLPIKKEM VSRDEALKLM KEKGEIYKVE LIEELEDDYV SLYHQGEFID
LCRGPHLPST GKVKAFKLLN AAGAYWRGDE NNKMLQRIYG TAFQKKKQLE EHLKMLEEAK
KRDHNKLGRE LDLFMTEESI GQGLPLLKPK GAKVVQILQR FVEDEEEKRG YQLTKTPYMA
KSDLYKISGH WDHYKEDMFI LGDEEKDDEV LALRPMTCPF QFMIYNSKLR SYRDLPLRYS
ETSTLFRNEA SGEMHGLIRV RQFTISEGHI ICTPEQLEEE FRGVVNLINY MMETLGIEDD
IWYRFSKWDP DNREKYIDNP TAWEESQDKM KNILDKLNID YVEAEGEAAF YGPKLDIQFR
NVHGKEDTII TVQIDFALPE RFDMTYIDKD NKKKRPYVIH RTSVGCYERT LAMLIEKYAG
AFPTWLAPVQ VEIIPVSDDQ VDYAYEVKGI LKEAGIRVEV DDTNEKLGYK IRQAQMEKIP
YMLIVGNREV ENRTVSVRDR KEGDLGAISI KEFKEKIVRE VEEKSH