Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3205 |
Symbol | |
ID | 7311788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3740203 |
End bp | 3741381 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643610107 |
Product | phosphopentomutase |
Protein accession | YP_002507475 |
Protein GI | 220930566 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAATA TAGATAGAGT AATAATGATT GTGCTTGACA GTGTTGGAAT AGGTGAACTA CCTGATGCAG CCGAATACGG TGATAAGGGG AGCAATACCT TAGGTAATAT TGTTAAAAAT TGCAAAGGAA TAAATCTTCC AAACCTTTGC AGGCTTGGGA TGGGGAAAAT TGACGGAGTA GATTATCTTT CTGTACCAGA GCATATTGTG GGTAGTTATG GGAGAATGGA CGAGGTATCA AAAGGAAAAG ATACTATAAC AGGGCATTGG GAAATTGCAG GGTTACAGCT TGCCCATCCC TTCCCCACAT ACCCTGACGG TTTCCCAAAG GAAGTGCTTG ATGAGTTTGA AAAGCTTACG GGAAGAGGTG TTCTTGCAAA CTGTGCAGCC TCGGGCACTG AAATAATCAA AGAGTATGGT GAGGAACATA TGAAGACCGG GAAACTCATA GTTTATACGT CTGCAGACAG TGTTTTTCAG ATAGCTGCAC ATGAGGAATT GGTTCCTCTG GAAGAATTGT ACCGAATTTG CAGTATAGCA AGGGAAATGC TGCAAGGAGA CCATATGGTA GGACGTGTTA TTGCAAGGCC GTTTATCGGT GAACCGGGCA ACTTTACAAG AACCCCAAAC AGAAGGGATT TTTCTGCCGA GCCTACCTCC GATACTATTT TGGATATTAT GAGTAAAAAG GGTCTGGATG TTATAGCAGT AGGAAAGATA GAAGACATAT TTTCCAAAAA AGGAGTCACT CTGGCCGAAC ATACAAAAAA CAATATGGAC GGTGTTGACG TTACCTTGAA ATTTATGGCT CAAAAAAACA CAGGCATGAT TTTTACAAAT CTTGTAGACT TTGATATGGT TTTCGGACAC AGAAACAATC CAGAGGGTTA CAAACAGGCC TTAGAGGAAT TTGACAACAG GCTGCCTGAA ATTTTGTCTG CCATGGGGGA TAACGACATG CTGATAATTA CGGCGGATCA TGGCTGCGAC CCTACTACTC CAAGTACGGA TCATTCAAGG GAATATGTAC CTGTAGTTAT CTATGGTAAG GGAATAAAAG AGGATGTAAA TCTGGGAACA AGAAAAACCT TTGCAGATAT AGCTTGCACT GTTGCAGAGG TATTTAACGC CGGGAACATA TTCCCGGGAC GAAGCTTTTT AAGAGAGATT ATCAAATAA
|
Protein sequence | MTNIDRVIMI VLDSVGIGEL PDAAEYGDKG SNTLGNIVKN CKGINLPNLC RLGMGKIDGV DYLSVPEHIV GSYGRMDEVS KGKDTITGHW EIAGLQLAHP FPTYPDGFPK EVLDEFEKLT GRGVLANCAA SGTEIIKEYG EEHMKTGKLI VYTSADSVFQ IAAHEELVPL EELYRICSIA REMLQGDHMV GRVIARPFIG EPGNFTRTPN RRDFSAEPTS DTILDIMSKK GLDVIAVGKI EDIFSKKGVT LAEHTKNNMD GVDVTLKFMA QKNTGMIFTN LVDFDMVFGH RNNPEGYKQA LEEFDNRLPE ILSAMGDNDM LIITADHGCD PTTPSTDHSR EYVPVVIYGK GIKEDVNLGT RKTFADIACT VAEVFNAGNI FPGRSFLREI IK
|
| |