Gene Ccel_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1780 
Symbol 
ID7310514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2138741 
End bp2139166 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID643608713 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_002506111 
Protein GI220929202 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA AAGATATAAT GACTACAAAT GTAACCTATG TTGAGCCAAA TGCTTCTATT 
CTCGATACTG CAAAGTTAAT GCAGCAGCAC AATGTAGGAT CAATTCCTGT TTGTGACAAG
GGAAGCGTTG TGGGTATGGT AACAGACAGA GACATCGTTG TCAGGAACAT TGCGATAGGT
AAAAATCCTC AGCAAACACC GGTAAGCGAT ATTATGACAA CTGGTGTAAC TTCTGTCAGC
CCTGACATGG AAATGTCACA AGTTACTAAA ATGATGGCTG ACAGCCAAAT AAGAAGGGTA
CCTGTAGTTG ACCAGAACAA TCTTGTAGGT ATTGTTGCGC TGGGCGATGT GGCTACCGAT
GCAAAATTTG ACACTGAGGT TGCCGACACT CTTACTGAAA TATCAAGACC TTCAAAGCCA
CAGTAA
 
Protein sequence
MKVKDIMTTN VTYVEPNASI LDTAKLMQQH NVGSIPVCDK GSVVGMVTDR DIVVRNIAIG 
KNPQQTPVSD IMTTGVTSVS PDMEMSQVTK MMADSQIRRV PVVDQNNLVG IVALGDVATD
AKFDTEVADT LTEISRPSKP Q