Gene Ccel_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1188 
Symbol 
ID7309991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1451501 
End bp1452652 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content39% 
IMG OID643608110 
Productaminotransferase class V 
Protein accessionYP_002505525 
Protein GI220928616 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.26379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAG AAAAATTACT TATGACTCCA GGACCTACAA TGGTTCCACC AAGGGTTTTA 
GAAGTTATGA GAAGACAAAT TATTCATCAT AGGACAAAGG AATTTGAAAC TATTTATGAT
GAACTGGAAG AAGATTTAAA ATTTGTTTTT CAAACAAAAA ATATGGTACT TATGTTTTCA
TCTTCCGGAA CAGGTGCAAT GGAATCTGCC ATCGTCAATC TATTTTCACA GGGAGATAAG
GTGCTGGCAA TAAGCATAGG AGCTTTTGGA GATAGATTTG CAGATATAGC TTCGACCTAT
GGTCTTAACG TTCAAAAACT GGCTGTTAAT TGGAGTGAAG CGGTAAATGT TTCAGAAGTA
AAAAAAATAT TGGATGCAGA CGTTAATAAT GAAATTAAGG CAATCCTTGT TACGCATAAT
GAAACATCAA CCGGTGTTAC AAACGATATT GAAGCACTTG GAAAACTCAC GAAAGATACT
GAAAGACTTT TGGTGGTTGA TGCCATAAGC TCTCTTGGAG GCTTGGACCT TCAGATGGAT
AACTGGGGAA TAGACTTGGT TGTAACAGGC TCACAGAAGG CGTTGATGGC ACCTCCGGGA
CTGGCATATG CAGCATTAAG TGATAAGGCA TGGGAAGCAG TTGGCAAATC CAAACTTCCT
AAATTTTATT GGGACTACAA AAAGTATAGA AAAGGGTTGT TGAAGGAATC AGAGAATCCG
CCATATACTC CAGCTATTTC TTTATTAATA GCTCAGGCAG AGGCCTTGAA GATGATGAAG
GAAGAAGGCC TTGAAAATGT ATATGCAAGA CACAAAAAAC TTGCATTGGC AACTCAGGCA
GGAGTAAAGG CACTTGGTCT TGAACTGTTC CCTGATGAGA AGGTATCTTC ATACATAATA
ACTGCTGTTA AAGCACCAGA GGATATCGAT ATTGCAAAAG TTATAAAAAC TATGAACCTT
AAGTATGACA TAATGATCAC AGGCGGTCAG AAGCATCTCA AGGGGAAAAT ATTCAGAATA
GGGCACTGCG GATATACAGA TGGTCTCGAT CTTATTAAAA CATTTGCAGC TTTAGAGTAC
TCTTTGAGTG AAGCAGGCTA TAAAGTTGAA ATGGGAGCAT CGGTTGGAGC AGTTCAGAAA
GCACTACTAT AG
 
Protein sequence
MEKEKLLMTP GPTMVPPRVL EVMRRQIIHH RTKEFETIYD ELEEDLKFVF QTKNMVLMFS 
SSGTGAMESA IVNLFSQGDK VLAISIGAFG DRFADIASTY GLNVQKLAVN WSEAVNVSEV
KKILDADVNN EIKAILVTHN ETSTGVTNDI EALGKLTKDT ERLLVVDAIS SLGGLDLQMD
NWGIDLVVTG SQKALMAPPG LAYAALSDKA WEAVGKSKLP KFYWDYKKYR KGLLKESENP
PYTPAISLLI AQAEALKMMK EEGLENVYAR HKKLALATQA GVKALGLELF PDEKVSSYII
TAVKAPEDID IAKVIKTMNL KYDIMITGGQ KHLKGKIFRI GHCGYTDGLD LIKTFAALEY
SLSEAGYKVE MGASVGAVQK ALL