Gene Ccel_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1006 
Symbol 
ID7309833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1250623 
End bp1252134 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content46% 
IMG OID643607933 
Productcarbohydrate kinase FGGY 
Protein accessionYP_002505348 
Protein GI220928439 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00908398 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAT TATTATTAGG TATTGATATT GGCACATCAG CGTGCAAGGT GGCAATTTTT 
GATTTGCAAG GAATGGTAAT AGCACAGTCA ACCAAGGAAT ACAAGGTTTA TTATCCCGCT
CCGGGCTATG TTGAGCAAAA TCCCAACGAG TGGTGGGAGA GCATATGTGC AGCTACAAAC
GAAGTAATAT CCAAGGCGAA AATTGATGCA AAGCAGATAA GCGGGATAGG AATTGACGGC
CAGAGCTGGT CTGCTATACC TGTTGATAAA TGCGGCAGGG TGCTACATAA TACGCCAATC
TGGATGGATA CCAGAGCCGC TGATCTGTGC AGGGAAACTG TTCAAAGAGT GGGTTTTGAC
AAGATTTTCA AGCTAAGCGG CAATTCTTTT GAGCCATCAT ATTCCACACC AAAGTTTATC
TGGTTCAAAA AAAATATGCC TGAAATTTAT AATTCAACTT ATAAATTCTT GCAGAGTAAC
AGCTTTGTTG CATTTAAACT CACCGGGAAA ATGACTCAGG ATTTGTCACA GGGCTATGGT
ATACACTCTT TTAACATGAA TGAGGGAAAG TGGGATGACG ACTTCTGCGA GGAGCTGGGC
TTTGACAGAG AGAAACTTCC TGAGATCTTC CAGTGTCATG AGGTCATCGG AGAAGTTACT
GCGGAGGCAG CAGCTTCAAC AGGACTGGCA ATAGGAACAC CGGTAGTGGC GGGAGGATTG
GATGCATCCT GTGGAACCCT TGGTGCGGGA GTTATAAAGG TAGGGCAGAC CCAGGAACAG
GGGGGGCAGG CAGGAGGCAT GAGTATATGC CTGGAAACTG CGGTTGCCCA TCCAAAACTT
ATTTTGAGCT ATCACGTTGT ACCGAATCTT TGGCTTCTGC AAGGCGGTAC AGTCGGAGGA
GGCGGAGCCA TAAAGTGGTT CAGGCAGGAA CTGGGTGCTT TTGAGGATTC GGTGGCAAAA
GAGGCAGGAA CAAGTCCATT TAAGGTTATG GATGATGAGG CTGAAAAAAT ACCCGCAGGT
TCAGACGGTC TTATATTTTT ACCGTACATG GCGGGAGAGC GATCACCTCT ATGGGATAAA
AATGCAAAAG GTGTATTCTT TGGACTTGGC TATGACAAAA CAAGGGCTCA CATGATTAGG
TCAGTCATGG AGGGCTGTGC ACTTGCACTG CAGCACAATC TGAAAACTGC AGAGGAAGCG
GGTGTAGCCG TACAGGAATT GGTAGCCATG GGTGGTGCGG CAAACAGCCG TCTTTGGACG
CAAATGAAGG CCGATGTTAC AGGACGGGTA ATAAAGGTTC CGACTTCCGA CACGGCAACC
ACTCTCGGAG CTGCAATACT GGCAGGGGTT GGAACAGGCC TTTACAAGAG TTTTGAACAG
GCGGTAAATG ACACCATCGT TATCACACGG ACCCATGAGC CGAATATGAA AGCCCATGAA
GCGTACAAGA GGAATTATGA AATATATATT GAGCTGTATG AAAAATTGAA AGATACAATG
CAAAAAATTT AG
 
Protein sequence
MEKLLLGIDI GTSACKVAIF DLQGMVIAQS TKEYKVYYPA PGYVEQNPNE WWESICAATN 
EVISKAKIDA KQISGIGIDG QSWSAIPVDK CGRVLHNTPI WMDTRAADLC RETVQRVGFD
KIFKLSGNSF EPSYSTPKFI WFKKNMPEIY NSTYKFLQSN SFVAFKLTGK MTQDLSQGYG
IHSFNMNEGK WDDDFCEELG FDREKLPEIF QCHEVIGEVT AEAAASTGLA IGTPVVAGGL
DASCGTLGAG VIKVGQTQEQ GGQAGGMSIC LETAVAHPKL ILSYHVVPNL WLLQGGTVGG
GGAIKWFRQE LGAFEDSVAK EAGTSPFKVM DDEAEKIPAG SDGLIFLPYM AGERSPLWDK
NAKGVFFGLG YDKTRAHMIR SVMEGCALAL QHNLKTAEEA GVAVQELVAM GGAANSRLWT
QMKADVTGRV IKVPTSDTAT TLGAAILAGV GTGLYKSFEQ AVNDTIVITR THEPNMKAHE
AYKRNYEIYI ELYEKLKDTM QKI