| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0460 |
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| Symbol | |
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| ID | 7309339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 528246 |
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| End bp | 529175 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643607390 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002504822 |
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| Protein GI | 220927913 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGTA TTTTAAATGT TTTAAAGCCG GCCGGAATGA CATCTTTTGA TGTGATTGGG
TATATGAGAA AACTAACCGG TCAAAAAAAG ATAGGGCATG CGGGTACACT AGATCCATCG
GCTGTCGGAG TTTTACCTTT ATGCATTGGT AATGCCACAA AGGCTTTAGA GTTTATGATA
AATAAGGATA AGGTTTACCG TGCGGAACTG ACACTTGGGA TTTCAACCGA TACCCAGGAC
TCTTCTGGTA CGGTTTTGTC TTTTCATTCA GTCGACGTAA CTGAAAATGA TATTAAAAAA
TCAATAATTA GTTTTATGGG TACTATAGAA CAGCTTCCTC CAATGTATTC TGCAATAAAA
ATTGGCGGTA AGAAACTCTA CGAATTAGCA AGACAGGGAC AGACGATAGA ACGGGAATCA
AGAACTATTC AAATTTACAA CATAGACATT ATCAGAATTT GGGATGATAG TGAAGTATTT
GAATCAGAAG GAATACCACA AGAATTTGCC ATAAAAAAAG TCCTTTTGGA TATTCATTGT
TCAAAGGGAA CATATATAAG GACATTATGC CATGATATTG GAGAAAAGCT TGGCTGCGGT
GGCCATATGT CATTTCTTGT AAGAACAAGG GCAGGACAGT ACGACCTTGA TAATTCTTTG
ACAATTGAAG AAGTCGCCCA ATTGTCAGAA ACTAAATCTC TTGAAGTTCA TTTATTGCCA
GTTGAAAAGG TATTTGAAGA GTATGATAGA ATAGAATTGA ACAAGGAAGA ACTTTTCAAG
TATAATAACG GAGTATGGCT CGAAGTAGAA AAAAACAAAT ATAAGAATAC CTTTTACAGG
GTATATAATA ATAATAGTTT TCTTGGGCTA GGAGAAGTTT TTGAAAAGGG AAATACTCTA
TATTTAAAAT CAAAAAAGTT TTTTAAATGA
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| Protein sequence | MNGILNVLKP AGMTSFDVIG YMRKLTGQKK IGHAGTLDPS AVGVLPLCIG NATKALEFMI
NKDKVYRAEL TLGISTDTQD SSGTVLSFHS VDVTENDIKK SIISFMGTIE QLPPMYSAIK
IGGKKLYELA RQGQTIERES RTIQIYNIDI IRIWDDSEVF ESEGIPQEFA IKKVLLDIHC
SKGTYIRTLC HDIGEKLGCG GHMSFLVRTR AGQYDLDNSL TIEEVAQLSE TKSLEVHLLP
VEKVFEEYDR IELNKEELFK YNNGVWLEVE KNKYKNTFYR VYNNNSFLGL GEVFEKGNTL
YLKSKKFFK
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