Gene Mnod_6497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6497 
Symbol 
ID7307275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6580806 
End bp6583517 
Gene Length2712 bp 
Protein Length903 aa 
Translation table11 
GC content70% 
IMG OID643604068 
Productvalyl-tRNA synthetase 
Protein accessionYP_002501569 
Protein GI220926267 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID[TIGR00422] valyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGACA AGACCTTCGA TCCTGCCGCC GTCGAGGCGC GCATCGCCGC CGAGTGGGAG 
GAGGCGCAGG CCTTCCGGGC CGGGCGCCCC GACCGGGCGG ACGCCGCCCC CTACAGCATC
ATGATCCCGC CACCGAACGT GACGGGCTCG CTGCATATGG GGCATGCCCT CAACAACACC
CTGCAGGACG TGCTCGCCCG CTTCGAGCGC CTGCGCGGCA AGGACGTGCT CTGGCAGCCC
GGCACGGACC ATGCCGGCAT CGCTACCCAG ATGGTGGTCG AGCGCCGCCT CGCCGAGCAC
CAGGAGCCCG ACCGGCGCAC CCTCGGGCGC CCGGAATTCG TGCGCCGGGT CTGGGAATGG
AAGGCGGAAT CCGGCGGCAC CATCGTCAAT CAGCTCAAGC GGCTCGGCGC CTCCTGCGAC
TGGTCGCGCG AGCGCTTCAC CATGGACGAG GGCCTGTCCA GGGCCGTCAT CAAGGTCTTC
GTCGACCTGC ACGCCGAGGG GCTGATCTAC CGCGACAAGC GCCTCGTGAA CTGGGACCCG
AAGTTCCAGA CCGCGATCTC CGACCTCGAA GTGCAGCAGG TCGAGGTGAA GGGCCATCTC
TGGCACTTCG CCTACCCGGT CGTGGACGAG GCCGGGCAGG AGACGGGCGA GACCATCACG
GTGGCGACGA CCCGGCCCGA GACGATGCTC GGCGACACCG CGGTCGCGGT CCATCCGGAG
GACGAGCGCT ACCGGGCGCT GGTCGGCAGG CGCGTGCGCC TGCCCCTCGT CGGGCGCCTG
ATCCCGGTCG TCGCGGACGA GTACTCGGAT CCCGAGAAGG GCACCGGCGC GGTGAAGATC
ACCCCGGCCC ACGACTTCAA CGACTTCGAG GTCGGGCGGC GCCACGACCT GCCGCTCGTC
AATGTCTTGG ATGAAGAAGC CCGCATAAGC CTCGACGGCA ACGAGGCCTT CCTGAAGGAC
GCTGCCCCCG AGCCGGAGAC CCTGGCGCTG CACGGGCTCG ACCGGGCGCA GGCGCGCAAG
GCGGTGGTCG CCCTGATGGA GGCGCGCGGG CGCCTCGTGG CCATCGAGCC CAACACCCAT
GCGGTGCCCC ATGGCGACCG TTCGGGCGAG GTCATCGAGC CCTACCTCAC CGACCAGTGG
TACGTGAACG TCAAGCCGCT GGCGGAGCGC GCTATGCGGG CGGTGCGCGA CGGGAAGACC
CGTTTCGTGC CGGAGGCTTA CGAGAAGACC TACTTCCAGT GGCTGGAGAA CATCGAGCCC
TGGTGCATCT CGCGCCAGCT CTGGTGGGGC CACCAGATCC CGGCCTGGTA CGATGCCGAG
GGCCAAGTCT TCGTGGCGGG GAGCGAGGAG GAGGCCCTGG CGAAGGCCGC CGCCCATCAC
GGCCGCCCGG TGGCGTTGCG CCGCGACGAG GACGTCCTCG ACACGTGGTT CTCCTCGGGG
CTCTGGCCCT TCTCGACGCT GGGCTGGCCC GAGGCGACGC CCGAGCTCGC CCGCTACTAC
CCGACCAGCA CCCTGGTGAC GGGCTTCGAC ATCATTTTCT TCTGGGTTGC CAGGATGATG
ATGCTGAGCC TTCACGCGAT GGACGAAGTG CCCTTCCGGA CCGTCTACAT CCATGCCCTC
GTCCGCGACG AGAAGGGCGC CAAGATGTCG AAGTCCAAGG GCAACGTGGT CGATCCGCTC
GATCTCGTCG ATCGCTACGG GGCGGATGCG CTGCGCTTCA CCTTGGCCGC CATGGCGGCG
CAGGGACGCG ACATCAAGCT TTCCATCCAA CGCGTTGAAG GCTATCGGAA TTTCGCGACG
AAGCTGTGGA ACGCCGCCCG CTTCGCCGAG ATGAATGGCT GCCGGATCGA TCCGGCCTTC
CGGCCGGAGG CTTTGCGCGA GACGCTGAAC GCCTGGGCGC TCGGCGAGGC CGCCCGCGCG
GTGGCCGAGG TGACGGCGGC GCTCGACGCC TTCCGCTTCA ACGACGCCGC GAACGCCGCC
TACCGCTTCG TCTGGAACGT CTTCTGCGAC TGGTACCTCG AACTCGCCAA GCCGGTGCTC
CAGGGCGAGG CGGGCACTGC GCAGGACGAG ACCCGCGCCA CGGTCGCCTT CCTGATCGAC
CAGATCTGCA TCCTGCTGCA TCCCTTCATG CCCTTCCTGA CGGAAGAGCT GTGGGCGACG
AAGGGCCAGG AGGCGGGGCT CGAGCGCGGG CTCCTGGCGC TCGCGCGCTG GCCGGATCTC
GGCTCCTTGA GCCGGCCGGA GGCCGAGGCC GAGATCGGCT GGGTGGTCGA TCTCGTCTCC
GAGATCCGCT CGGCCCGGTC CGAGACGAAC GTGCCGGCCG GCGCCCAGAT CCCGCTGGTG
CTGGTGAACC CGAGCGAGGC CGTTCAGGCG CGCCTCGCCC GCTGGGGCGA GACCGTGCGG
CGGCTCGGCC GCATCGCCGA GATCGGCACC GTGGCGCAGA GCCCCGCGAA GGCAATCCAG
CTCCTCGTGC GCGGGGAGGT GGCGGCGCTG CCGCTCGAAG GCGTGGTGGA TCTCGCGGCC
GAGGTGGCAC GCCTGCGCAA GGAGGAGGGC AAGCTCGACG GCGAGATCGC CAAGATCGAC
GCCAAGCTCG CCAATGCCGA CTTCCTGGCC CGCGCGCCCG AGGAGGTGGT CGAGGAGCAG
CGCGAGCGCC GCGAGGCGGC GGCCGAGCGG ATCGGCAAGG TGCGCGAGGC GCTGGTGCGG
CTGGAGGGAT AG
 
Protein sequence
MMDKTFDPAA VEARIAAEWE EAQAFRAGRP DRADAAPYSI MIPPPNVTGS LHMGHALNNT 
LQDVLARFER LRGKDVLWQP GTDHAGIATQ MVVERRLAEH QEPDRRTLGR PEFVRRVWEW
KAESGGTIVN QLKRLGASCD WSRERFTMDE GLSRAVIKVF VDLHAEGLIY RDKRLVNWDP
KFQTAISDLE VQQVEVKGHL WHFAYPVVDE AGQETGETIT VATTRPETML GDTAVAVHPE
DERYRALVGR RVRLPLVGRL IPVVADEYSD PEKGTGAVKI TPAHDFNDFE VGRRHDLPLV
NVLDEEARIS LDGNEAFLKD AAPEPETLAL HGLDRAQARK AVVALMEARG RLVAIEPNTH
AVPHGDRSGE VIEPYLTDQW YVNVKPLAER AMRAVRDGKT RFVPEAYEKT YFQWLENIEP
WCISRQLWWG HQIPAWYDAE GQVFVAGSEE EALAKAAAHH GRPVALRRDE DVLDTWFSSG
LWPFSTLGWP EATPELARYY PTSTLVTGFD IIFFWVARMM MLSLHAMDEV PFRTVYIHAL
VRDEKGAKMS KSKGNVVDPL DLVDRYGADA LRFTLAAMAA QGRDIKLSIQ RVEGYRNFAT
KLWNAARFAE MNGCRIDPAF RPEALRETLN AWALGEAARA VAEVTAALDA FRFNDAANAA
YRFVWNVFCD WYLELAKPVL QGEAGTAQDE TRATVAFLID QICILLHPFM PFLTEELWAT
KGQEAGLERG LLALARWPDL GSLSRPEAEA EIGWVVDLVS EIRSARSETN VPAGAQIPLV
LVNPSEAVQA RLARWGETVR RLGRIAEIGT VAQSPAKAIQ LLVRGEVAAL PLEGVVDLAA
EVARLRKEEG KLDGEIAKID AKLANADFLA RAPEEVVEEQ RERREAAAER IGKVREALVR
LEG