| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0931 |
|---|
| Symbol | |
|---|
| ID | 7298601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 1049530 |
|---|
| End bp | 1049952 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643593723 |
|---|
| Product | protein of unknown function DUF107 |
|---|
| Protein accession | YP_002491348 |
|---|
| Protein GI | 220916044 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.890886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGT GGATGTGGGT GCTGGCCGGG ATCGGCCTGC TGGTGGTGGA GCTGGTCACG
CCGGGCGGGC TGTTCGCGCT GTTCTTCGGC GTGGGCGCGC TGGTGGTGGC GCCCGCCGCG
GCGGCGGGCC TGGGTCGTGT CGGGCAGTGG CTGCTGTTCA CCGCCGTCTC GCTGGCGCTG
CTCGCGACGC TGCGCCGCCG GCTGCAGGAC CGCCTGTCGC GGCGCCCGGG GGGCGCGGTG
GACTCGCTCG TCGGCGAGGA GGTCGTGCTG ATCGGCGACG TGCCCGCCGG CGGCGAGGGG
CCCGCCGAGC TGCGCGGTGT GCCCTGGCGC GCGCGGGCGG TGGGCGGCGA CGCGCTCCGG
GCCGGCCAGC GCTGCCGGGT GGAGCGGGTC GAGGGCGTGC TGCTGTGGGT CCGCGCCGCC
TGA
|
|---|
| Protein sequence | MDWWMWVLAG IGLLVVELVT PGGLFALFFG VGALVVAPAA AAGLGRVGQW LLFTAVSLAL
LATLRRRLQD RLSRRPGGAV DSLVGEEVVL IGDVPAGGEG PAELRGVPWR ARAVGGDALR
AGQRCRVERV EGVLLWVRAA
|
|---|
| |