Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_2070 |
Symbol | |
ID | 7287996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 1963356 |
End bp | 1964150 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643585066 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002482794 |
Protein GI | 220907483 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0224916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACACT CCAACGTTAC GCTCAAGCTT CTCCTGGGGG GACTCTTACT CACGGGTTGT GCCAATTCTG CCGCAAACAG CCCTACCTCA ACCTCCTATA GCCCCGCCCT AGCTACAACT ACGGCAAAAA ATAATTTGCC TGAGGGATCG GTGGCAAACG CCGAGTCCCA AAAGATTGCT ATGGCTAATA ACCTGCTGGA GAAGGGTAAA AAAGCCCAGG AAAAAGGCCA GCACCAGGAA GCGATCAAGG CTTTTCAGCG CTCCGTCAAG CTTAATCCTG ACAACCTCAG CGGCTATCAG CTCCTCAGTG AGGCTCAGTT TCAGGCTGGG GAGCAGGAAG CGGCCATTGC TACGTTACAA ACGGCTCTAA AGAGAAAGCC AAACGATATT GCTATGCTCA ATACGCTGGG GATGGCGTAC CTCTCTAGCG ATCGGCTAAC GGAAGCAGAG CGGATCCTCA GTCAGGTGAC CGATCTGCAA CCGAGCAACA AAACGGCCTA TTTCAGCCTC AGCCTGGTTC AGCAACGCTT ACGCCAATTT GAGCGGGCGA TCGAGAATGC CCAACGCGCT GCCAAGCTAG AGCCAGAGAA CCCCCACCCC CTGGTTGTGC TGGCCGTTAC GCAATGGGAT ATGGGCGATC AAACGAAAGC GGTACAGACC TATAAGCAAG TGCTCAAAAA AGCCCCCCAG TACGGCAATC AAACCTATCT GATTTACCTG AAACCAGAAG GGTTTAACGC TGACCAAATT CAGGTGGTCG AAGCGGTGCT CACTGCCACG AAAAAGAAGT CATAA
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Protein sequence | MLHSNVTLKL LLGGLLLTGC ANSAANSPTS TSYSPALATT TAKNNLPEGS VANAESQKIA MANNLLEKGK KAQEKGQHQE AIKAFQRSVK LNPDNLSGYQ LLSEAQFQAG EQEAAIATLQ TALKRKPNDI AMLNTLGMAY LSSDRLTEAE RILSQVTDLQ PSNKTAYFSL SLVQQRLRQF ERAIENAQRA AKLEPENPHP LVVLAVTQWD MGDQTKAVQT YKQVLKKAPQ YGNQTYLIYL KPEGFNADQI QVVEAVLTAT KKKS
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