| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2176 |
|---|
| Symbol | |
|---|
| ID | 7285892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2622536 |
|---|
| End bp | 2625559 |
|---|
| Gene Length | 3024 bp |
|---|
| Protein Length | 1007 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643582998 |
|---|
| Product | Hpt sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002480750 |
|---|
| Protein GI | 220905438 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATAA GAGCGCTTAT AAAAACTTCC AACATGGCGC AACTGTGCCT GGTCCTTCTG
CTCAGCCTGT GCACGGGCTG GCTTGGCCGC AGTCTGTACG AGATCAACGG CCTCCTGCAT
AATTACCATC ATCTTGAAAG CCTGCTGGCG GAAATAGGCG GCATTTCGCG CGAGAATTAT
CGAGCGGCCC TTGATTACAT CAGCACCGGC GATACTTTTC ATCTAGAACG CTGGCGGCAT
CTGCTGCGCA TGGAGCGGGG CGAGGCCCCC CGCCCGTCAA CGGCCCAGAT TGCGCCCGGT
GAGCGCCGCT CGTTGACCTC GCTGGTCGAC GGGCTGGAAA CGACCGGTCC CGTACGCGCC
CAGGTGCAGT CTATTGTGGC CCAGCTTGTC CTGCTGGAAT CAATGACGGA AGCCGCTGTG
CGCAATGCCC TTAAAAGCGG GCCGGAGGCG AGCGTGGCGC AGGCCCGGCA AGACAGGCAA
GCGGCCCTGC TTTGGGTACA CGACAACGGC CTGGCCCGTA TTCCGGACTC CATAGCTGAA
GCTGCGCGCA GGCTGGGCGA CAAACAGCGC GCCGAATTTT TGGCCCGCCT TGGCGAACGC
GAGGCCCCGC TGCGCTGGAC GCTTGTGGCC GCCCTGGCGG GGCTGGCGCT GCTCGGCAGC
AGTGTGCTGG GCAATGCCTA TATTTTCCAG AGCCGCATAG CCAATCCCCT GGACCGGGTA
AGCAGGTATG CCGAAAGCGT CGCCGCCGGA CTGGATCCGC TGCCGCTGCA CCTGCGGCAC
AGGGATGAAC TGGCGGTCAT GTTCGCCTCG TTGCAGCGCA TGAAGGGAAC GCTCTATTCG
CGTATCCGTG AGCTCAGAGA GGCGGAACAG CGCGCACGCA GAAGCCGCCA GCAGGCGGTG
CTGGCCCGGT CGCAGGCGCT TACCTCGCTG GAGCTGGCCC AGAGGGCCTC ACATGTGCAG
GATGATTTTC TGCGGCGTAT CAGTCATGAA ATACGTACGC CGCTCAACGC CATTATAGGC
ATGAGCTACC TGAGCCTGCA GACGGATCTT AATGGGGTGC AGCGGGATTA CCTGGCGCAG
ATCAACAAAT CCGGCAGTGT ATTGCTGGAT ATGGTGAACC GCATCCTGGA TTTTTCCAGC
GCCAGTGAAG GTTCCATCCG TACGGAGCGA AAGGTTTTTG CCGTTGCAGA CCTTATGGAC
CTGCTGCGGC AGAGCGTGGC GGGGCTGGCC CTTGAAAAGC GCCTGCGCCT CAATTTTGTG
CTTGATCCCT CCATCCCGGC TGTGGTGGCG GGCGACGAGC GTCACCTGGA GGAAGTGCTG
CGCATTCTGC TGGACAATGC CGTCAAGTAT ACGGCCAGCG GCAGTGTGGA TTTTCGTATC
CTGCCTTCGG GTGAGCCGCC CATGCGCAAG GGGGCCATAC GACTGCTCTT TGTGGTTTCG
GATACCGGGC CGGGCCTGGG CGAGGAGCAG TGGAAAAAAC TTTTTGAGCC GTTTACCCTT
GGCGACGAAT CCATGACACG CTCTTTCAGC GGTCTGGGGC TGGGGCTTGC CCTGGCGCGG
CAGCTGGTCA GCCTTATGGG TGGCGAACTG AAAGTGGGCA GCGTGCCGGG GCAGGGCAGC
CGTTTTTCTT TTTCTGTGGA TATGGAGCAG CCGGACGCTT CCGGCGGGTG TGAAGACGCG
GAGCAGCCAG CAGATGGGGC AGCAGGGAAT AGATCCTCCA TCCGGTCTGG CCCGCCCGAT
GTGTCCGGCG TGTCCGGTTT ACCGGAGACG CCCAGCCTGA CAGGGCCGGC ATACCCGGCT
GCCTTGCCCC ATATGCCCAT TCTGCCCGGC CCGGCTGGCA TGGCCGGACC GCAAGCCGAA
GCGCCGGCCG GCGACAGTGT GGGGGCGCCT TCCACGGCTT TTGCCGTGCT GGTGGTGGAA
GACAACGAGA TAAACGCGCA GATTGCGCGT GAGCTGCTTG AGCAGGCCGG GCTTGAGGTT
CTGCTGGCCG CCAACGGGCA GGAGGCGCTG GATTTGCTGG ACAATCCCGT ACATCCGCCG
CTGGGCCTTG TGCTTATGGA TGTGCAGATG CCGGTTATGG ATGGCCTTGA GGCCACGCGG
CGCATCCGGG CCATGGGTAT CAGCCCTGTT GACCTGCCGG TGGTCGCCAT GACCGCCCAC
ACAGATATGG CCTCGCGTAT GGACGGCAAG GATGTGGGCA TGAATGACTA TCTTACCAAG
CCCGTGAATC CTGAAACGCT ATACGCCACA CTGGAAAAAT GGCTTGTGGG CGGTCTTGGG
CGCAACCCTG TCAAGCAGGC TCACGAGGAC GGCGGCGCAG CGGAACTGCC CGAAAACGGC
AGCCAGGGCG CATGCACACC TGCGGGCAGG GGCATGGTCG CCCCTGCTAC GGCGGCTTTA
CCTGATGCGG CACAGGCCGT TTCCATTATC AATGTGGAAT CCGGTCTTGC TACTGTGGGC
GATAACAGGA AGCTGTATTT TGAGCTTCTT CAGCGTTTCG TTGACCACTA TGGCGACAGT
CCCGCCCGTC TGCGCAAAAT GCTTGAGAGC GGCAACCTTA AGGGGGCCGC GCGTATGGCG
CATACGGTCA AAGGGGTAGC CGCCAACCTG GGCGTGGAGC GTATCTGCGA ACTTACCCGC
ACGATGGAAG AGTTTTTGCC CCACAACCTG CCGGAGCACG CTGTGCTGGA GGCTTTTGAG
GTAGAAATGG GGCGGGTGCT CGACTATGTG CGGAGCATGG GGCGGCATAC CTGCCGTACG
GCCAGCGGTT CCGGGCAACT GGCAGAGGAA CACCGCGCGG CCTTGCTGGC CTTTCTGGAG
GATCTGCCCC GCCGCATGGA AACGGATTGG GGCGCGATGG AAAGCGCGAT GGAAAATTTT
TCTTTGCTGG CCGACGGCAC CCCCCACGCC GAAGGAGTGG CCGCCATATT GACGGCAGTC
AAGGATTTTG ACATGGGCGG AGCGGGGTGT CTTGCCGACA ACCTGCGCGA CAGCCTGTTG
CGAGAATCCG CCACGAAGGC GTAA
|
|---|
| Protein sequence | MSIRALIKTS NMAQLCLVLL LSLCTGWLGR SLYEINGLLH NYHHLESLLA EIGGISRENY
RAALDYISTG DTFHLERWRH LLRMERGEAP RPSTAQIAPG ERRSLTSLVD GLETTGPVRA
QVQSIVAQLV LLESMTEAAV RNALKSGPEA SVAQARQDRQ AALLWVHDNG LARIPDSIAE
AARRLGDKQR AEFLARLGER EAPLRWTLVA ALAGLALLGS SVLGNAYIFQ SRIANPLDRV
SRYAESVAAG LDPLPLHLRH RDELAVMFAS LQRMKGTLYS RIRELREAEQ RARRSRQQAV
LARSQALTSL ELAQRASHVQ DDFLRRISHE IRTPLNAIIG MSYLSLQTDL NGVQRDYLAQ
INKSGSVLLD MVNRILDFSS ASEGSIRTER KVFAVADLMD LLRQSVAGLA LEKRLRLNFV
LDPSIPAVVA GDERHLEEVL RILLDNAVKY TASGSVDFRI LPSGEPPMRK GAIRLLFVVS
DTGPGLGEEQ WKKLFEPFTL GDESMTRSFS GLGLGLALAR QLVSLMGGEL KVGSVPGQGS
RFSFSVDMEQ PDASGGCEDA EQPADGAAGN RSSIRSGPPD VSGVSGLPET PSLTGPAYPA
ALPHMPILPG PAGMAGPQAE APAGDSVGAP STAFAVLVVE DNEINAQIAR ELLEQAGLEV
LLAANGQEAL DLLDNPVHPP LGLVLMDVQM PVMDGLEATR RIRAMGISPV DLPVVAMTAH
TDMASRMDGK DVGMNDYLTK PVNPETLYAT LEKWLVGGLG RNPVKQAHED GGAAELPENG
SQGACTPAGR GMVAPATAAL PDAAQAVSII NVESGLATVG DNRKLYFELL QRFVDHYGDS
PARLRKMLES GNLKGAARMA HTVKGVAANL GVERICELTR TMEEFLPHNL PEHAVLEAFE
VEMGRVLDYV RSMGRHTCRT ASGSGQLAEE HRAALLAFLE DLPRRMETDW GAMESAMENF
SLLADGTPHA EGVAAILTAV KDFDMGGAGC LADNLRDSLL RESATKA
|
|---|
| |