Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1442 |
Symbol | |
ID | 7285138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1726873 |
End bp | 1729281 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643582251 |
Product | homocysteine S-methyltransferase |
Protein accession | YP_002480022 |
Protein GI | 220904710 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.195548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTCA GACAAGCGCT CGGTTCGGGA CGTCCTCTTT TGCTTGACGG CGCCATGGGC ACCATGCTTC AGGCTTCCGG TCTTCCTGCG GGTACAAGCC CGGAAGAATT TTGCATGGAA AATCCCGATA TTCTGCGGGG TATCCATGCG TCCTACCTCA AGGCGGGCGT TGATCTGCTT ACGTCTTGCA CCTTCGGCGG CAATGCTTAC AAGCTTTCGA AAAATCTTGA TGTTTTTTCT TTTAACAAGC GTATGGCCTC GGTGGCGCGC GCGGCTGCGG CCGATGTGTC ACGCCCTGAC GGCCGCCCGA TTTTCGTGGC GGGCAACGTG GGACCCACCG GACATTTCGC CAAACCTTTG GGTCCTGTTG AACCTGCCGA GCTTATTGAA GTTTTCGCCC AGCAGATACG AGGGCTTGTG GCCGGCGGGG CTGATCTTGT TTTCATCGAA ACCCAGTTTG ACCTGGCCGA GGCCAGGGCC GCCGTGGTGG CCGCCAGACA GGTCTGTGAC CTGCCGGTAA TGGTTTCTAT GACTTTTGAG CAGGGCGTAA GCCTTACGGG ATCTACCCCC GCCATATTTG CCGAAACCAT GCAAAACATG GGCGTGGATG TGGTGGGAAC CAACTGCAGC CTCGGGCCGG AACAGATGGA GCCTGTGGTT GCCGAACTTC TGGGCGTGTG CGCCTGCCCG GTCATGGCCG AGCCGAATGC CGGCCTGCCC GAGCTGCGGG GAACGCAGAC GGTATTCCCG CTGGGGCCGG AGGACTTCGC CCGCAAGACA GCTTCTTTTG CCCATATGGG CGCGCAGGTG CTCGGCGGCT GTTGCGGTAC CACACCCGAA CATCTTGCGG CTCTGGCGCA CAGTCTGCGC GGCCTTGGCG AGGTGCGCCC CACGGGTGTG AAGCGCAGCG GCATCTGCCT GACGAGCCGT TCGCAGATGG TGCGCATCGG CGCGGGACGG CCTCTTGCCA TTATCGGCGA ACGTATCAAT CCCACAGGCA AAAAGCAGCT TACTCTTGAA CTTCAGGAAG GGCGCTTTGA CACGGCCCTG CAATTTGCTG ATGCGCAGAT TGAGGCCGGA GCCACTGTAC TGGACGTGAA TGTGGGCGCG CCGCTTGTGG ATGAAACCGC GCTTTTGCCC GACCTGGTGC AGCGTCTGGT GGGGCGGCTC ACGGTGCCGC TTTCTCTGGA CTCATCCAAT GCCCAGGCCA TTGCCGCCGC CCTGCCGTAC TGCCCCGGCT CTTTTCTGGT GAATTCCATC AGTGGCGAAG AAGGCCGGAT GGAACTGCTG GGGCCTCTAT GCCGCGATTA CGGCGCGCCT TTCATCCTGC TGCCGCTCGA GGGCGCAACC TTGCCCGAAA AGGCCGTGGA ACGGATCCGC ACTGTGGAGA GCCTTCTTCT GCGGGCGGAA CGTCTCGGCA TTCCACGGCG GCTCATGATG GTGGATATTC TGGCTCTGGC AGTCTCCTCC AGTCCGGACG GCGCGCGCCA GTGCCTTGAA ATGACGCGCT GGTGTGCAGA GCAGGGCCTG CCGACAACCC TGGGGCTTTC CAATCTTTCT TTCGGCCTGC CCGCGCGCGA CCTGCTTAAT GCCACATTTC TGGCCTACGC CGCCGGAGCG GGACTTTCAT CGTGCATTGC CAATCCATCA GCCCAGCGCC TGCGCGAGGC GGCTGATGCA CTCAAGGTGC TGGGCGAGCA TGATCCCCAT GCGTCTTCAT TCATTTCAAG TTACGCCAAC TGGAAGCCCG GCGAAGGCAG CGTACTGCAA CGCCAGGGGG GCGGTGGGGC GTCCAAAAGC CTTGGCGAGG CCGTACTCAA CGGCGACAGG GAAAATGTCC TGTCCCTGCT TGAAGCCGAA CTGGCCGCAG GGGCCGAGCC TTTCAGCCTT GTGCAGGAAG TGCTTATTCC GGCTATTACC GAGGTGGGCG CACGCTACGA ACGGCGCGAA TATTTTTTGC CCCAGCTTAT CCGCGCGGCC GAAACCATGC AGACGGCTTT TGGTCATCTG AAGCCTCGCC TCGAGGCCGG GCGGGGGGCC GAAGAGCGCC CTGTGGTGAT TATGGCCACG GTGGAAGGGG ATATTCATGA TATTGGCAAA AATATTGTTT CCCTGCTTTT GGGAAACCAC GGTTTTGATG TGATTGACGC GGGCAAGGAT GTGCCTGCCG AAGATATCGT GGCTTGCGCC CTTGAGCATA ACGCGCGTAT TATCGGCCTG TCGGCCCTGA TGACCACGAC AATGGTGCGT ATGGAAGACA CCATAAAACT GGTGAAGGAA AAAGGGCTGG CTATCAAGGT GATGGTGGGG GGCGCGGCTG TTACCCAGGC TTTTGCCGAT GCGATCGGGG CCGATGCCTA CTGTGCGGAT GCCGTGGGCG CTGTGCGGGC CGCCAAGAAT TTTATGTAG
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Protein sequence | MTFRQALGSG RPLLLDGAMG TMLQASGLPA GTSPEEFCME NPDILRGIHA SYLKAGVDLL TSCTFGGNAY KLSKNLDVFS FNKRMASVAR AAAADVSRPD GRPIFVAGNV GPTGHFAKPL GPVEPAELIE VFAQQIRGLV AGGADLVFIE TQFDLAEARA AVVAARQVCD LPVMVSMTFE QGVSLTGSTP AIFAETMQNM GVDVVGTNCS LGPEQMEPVV AELLGVCACP VMAEPNAGLP ELRGTQTVFP LGPEDFARKT ASFAHMGAQV LGGCCGTTPE HLAALAHSLR GLGEVRPTGV KRSGICLTSR SQMVRIGAGR PLAIIGERIN PTGKKQLTLE LQEGRFDTAL QFADAQIEAG ATVLDVNVGA PLVDETALLP DLVQRLVGRL TVPLSLDSSN AQAIAAALPY CPGSFLVNSI SGEEGRMELL GPLCRDYGAP FILLPLEGAT LPEKAVERIR TVESLLLRAE RLGIPRRLMM VDILALAVSS SPDGARQCLE MTRWCAEQGL PTTLGLSNLS FGLPARDLLN ATFLAYAAGA GLSSCIANPS AQRLREAADA LKVLGEHDPH ASSFISSYAN WKPGEGSVLQ RQGGGGASKS LGEAVLNGDR ENVLSLLEAE LAAGAEPFSL VQEVLIPAIT EVGARYERRE YFLPQLIRAA ETMQTAFGHL KPRLEAGRGA EERPVVIMAT VEGDIHDIGK NIVSLLLGNH GFDVIDAGKD VPAEDIVACA LEHNARIIGL SALMTTTMVR MEDTIKLVKE KGLAIKVMVG GAAVTQAFAD AIGADAYCAD AVGAVRAAKN FM
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