| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0955 |
|---|
| Symbol | |
|---|
| ID | 7284635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1112280 |
|---|
| End bp | 1113176 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643581755 |
|---|
| Product | Polyprenyl synthetase |
|---|
| Protein accession | YP_002479540 |
|---|
| Protein GI | 220904228 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATGATGC CAGTATCCCG GATGAAGGAA CTTTTGCGCG AACGCGGGCA AATGGTGGAA
GAAGAGCTTG CCGTCTGCCT TGACGGCCGT GCTGTGCCGC AGCGCCTCAA GGACTCTATG
CTATACAGCC TCCAGGCTGG CGGTAAACGC CTGCGCCCTG TACTCTGCCT GAGCGCTGCC
GCCCTGTGCG GTCTGCCGCT GCGCGATGCT TTGCCCTTTG CCTCGGCCAT CGAGATGATT
CATACCTATT CGCTGGTACA TGATGATCTT CCGGCTATGG ATGATGACGA CCTGCGCCGT
GGCAAGCCTT CAAACCACAA AGCATTTGAC GAGGCCACAG CCATTCTTGC GGGTGATGGT
CTGCTGACGG ACGCATTTCT GATGATGTGC CGCAGCCCCC TGGCCCCGCC GCGCGTGTTG
CGGGCCATCA GCGAACTGGC CCTGGCCGCC GGCTCTTCCG GCATGGTGGG CGGGCAGGAA
TGGGACATGA TATTTACCGG CAAGGACTTG GTATCCATTG AAGACCTGCG CGGCATTCAC
GCCATGAAGA CAGGCGCGCT GCTGCGGGCT TCCTGTGTAT GCGGGGCCAT GCTGGCCGGG
GCTTCGGATG AAGACCTGGC TGCCATCGGC TCCTATGGCG CAGCCCTTGG CGTGGCGTTT
CAGATTGCCG ATGACATCCT TGACGTGGTG GCTGACACCG CCACTCTGGG CAAACCCGTG
GGCAGCGATG CAGCCCAGGG CAAGAAGACC TATCCCGCCC TGCTGGGGCT TGACCAGAGC
CGTGCTCTGG CGCGGGAGCA GGCCGAAAAG GCCAAGGCCG CACTTGCGGG CTTCAGCGGG
GACGAGGCGG ATTTTTTGCG TGCATTAGCT GACTATACGG TCACCAGGGC GGCCTGA
|
|---|
| Protein sequence | MMMPVSRMKE LLRERGQMVE EELAVCLDGR AVPQRLKDSM LYSLQAGGKR LRPVLCLSAA
ALCGLPLRDA LPFASAIEMI HTYSLVHDDL PAMDDDDLRR GKPSNHKAFD EATAILAGDG
LLTDAFLMMC RSPLAPPRVL RAISELALAA GSSGMVGGQE WDMIFTGKDL VSIEDLRGIH
AMKTGALLRA SCVCGAMLAG ASDEDLAAIG SYGAALGVAF QIADDILDVV ADTATLGKPV
GSDAAQGKKT YPALLGLDQS RALAREQAEK AKAALAGFSG DEADFLRALA DYTVTRAA
|
|---|
| |