Gene Ddes_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0125 
Symbol 
ID7283779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp161550 
End bp162761 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content58% 
IMG OID643580913 
ProductSaccharopine dehydrogenase 
Protein accessionYP_002478723 
Protein GI220903411 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATA TCCTTATCAT CGGCGCGGGT GGCGTCGGGA GCGTGGTTGT CCACAAATGC 
GCCCAGGTTG CCGCAAACGG CGGCGTTTTT AACAAGATAA CCCTTGCCAG CCGCACGGTC
TCCCGCTGCG ATGCCATTGC GCAAAGCGTA AAGGCCCGCT ACGGCGTTGA CGTGGCTACC
GCCAAGGTGG ACGCGGACAA CGTGCCGGAG CTTTGCCAGC TTATCCGCAG CGTCAAGCCC
GACCTTGTGT GCAACGTGGC CCTGCCCTAC CAGGACCTGC ACATAATGGA TGCCTGCCTT
GAATGCGGCG TTCATTATGT GGACACCGCC AACTATGAGC CGCTGGACAC CGCCAAGTTT
GAATACAAAT GGCAGTGGGC CTATGCCGAC CGCTTTCGCG AGGCCGGGCT TACCGCCCTG
CTCGGTTCCG GCTTTGACCC CGGCGTGACC AACGTCTTTG CCGCCTGGGT CATGAAGCAC
GAACTGGACG AAGTGCATGT GCTCGACATC ATCGACTGCA ATGCCGGCGA CCACGGCCAG
CCCTTTGCCA CCAACTTCAA CCCCGAAATC AACATCCGCG AGGTCACCGC GCGCGGCCGC
TACTGGGAAC GGGGCGAATG GGTAGAAACC GACCCCCTGT CCTGGTCAAT GAACTTTGAC
TTCCCCAGCG GCATCGGCAG CAAAAAATGC TTTCTCATGT ATCATGAAGA GCTGGAATCT
CTGGTCAAAA ACCTCAAGGG CCTGCGCCGC GCCCGCTTCT GGATGACGTT TTCAGACAAC
TACCTCAACC ACCTGAAGGT ACTTGGCAAT GTGGGCATGA CCCGCATTGA TCCCGTGAAC
TTTCAGGGGC AGGACATCGT ACCCATCCAA TTCCTGTCCA AACTTTTGCC CGACCCTGCC
TCCCTCGGCC CCCTGACCAA GGGCAAGACC TGCATTGGCG ACCTCATGCG CGGCGTCAAG
GACGGCAAAG AAAAAACCGT TTACATCTAT AACATCTGCG ATCACGAAGC ATGCTACGCC
GAAGTCGGCT CGCAGGCCAT TTCCTACACC ACCGGCGTGC CTGCCATGAT CGGCTCCAAA
ATGGTGGCCG AAGGCGTGTG GCGCAAGCCC GGCGTGTGGA ATATGGAGCA GTTTGACCCC
GACCCCTTCC TGAAGGATCT GGGTACATAC GGCCTGCCCT GGCAGTCCGT GGATGTGACC
GGAAAAATAT AA
 
Protein sequence
MANILIIGAG GVGSVVVHKC AQVAANGGVF NKITLASRTV SRCDAIAQSV KARYGVDVAT 
AKVDADNVPE LCQLIRSVKP DLVCNVALPY QDLHIMDACL ECGVHYVDTA NYEPLDTAKF
EYKWQWAYAD RFREAGLTAL LGSGFDPGVT NVFAAWVMKH ELDEVHVLDI IDCNAGDHGQ
PFATNFNPEI NIREVTARGR YWERGEWVET DPLSWSMNFD FPSGIGSKKC FLMYHEELES
LVKNLKGLRR ARFWMTFSDN YLNHLKVLGN VGMTRIDPVN FQGQDIVPIQ FLSKLLPDPA
SLGPLTKGKT CIGDLMRGVK DGKEKTVYIY NICDHEACYA EVGSQAISYT TGVPAMIGSK
MVAEGVWRKP GVWNMEQFDP DPFLKDLGTY GLPWQSVDVT GKI