Gene Ddes_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0059 
SymbolinfB 
ID7283710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp76502 
End bp79495 
Gene Length2994 bp 
Protein Length997 aa 
Translation table11 
GC content64% 
IMG OID643580844 
Producttranslation initiation factor IF-2 
Protein accessionYP_002478657 
Protein GI220903345 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00487] translation initiation factor IF-2
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAG AAAAAATTAA AGTATCGGAA CTTGCCAAGG AATTTCCGGC AGTGCCCAAC 
AAGGATATGC TGCGCGCATT GCGCGAGCTG GGCGCGTCGG CAAAATCTAT GGCCGGGTCC
CTGACCACTG AGGAGGCGGC ACGCGTGCGC GAACATTTTG CCGAACAAAA ACAGGCGGAT
GCCGAGCGTT CCGGCTCACA CCCCAATGTC ATCGTGCGCC GTCGCCGTAA GGATGCCGAT
AAGGCCGACG CCCCCGAAGT GACAGAAGCG GCCCCCGCCG CCAGGGAAGA GGTCGCTCCT
CCGGCCGAGG AAAAGCCCGC GGCGGTTGAA GCCCCCGCCC AGGCCGAGCC TGTGGCCGAA
GCTCCTGCGG CAAGCCCGCA CAAGGTCGAG GAAAAGGCCG CGCCTGAAGC CGCAAAGGCC
GAACCCGCCG AAAAAGCAAA AAGCTCCAAG GCCAGGGTTG TGTCTGCGGC TCGCGTTATC
AGCCGCCCCG GCGAAGAAGA AGAAAAAAAG CCCGAACCCG TGGTGGAAAG CAAGCCCGAG
CCTGTGGCGG AAATTTCGCC CGTGGCCGCG GCTCTTGCTG CCCGTGAAGC CGCCGCCAGG
GCCGAAGAAA AAAGTTCTGA AAAAGGCGAA GAAAAAGGCG CCAAGGCTGC CCGCCTGGCC
CGTCCCGACG CTTCAGCCAT GCCCGAAGGC TCATCGGCGC CCACCCTGCC CCAGCGCGCG
CCCGAAGCCC GTACAGAAGC CTGGAAAGAC GCCGACGCTT CCGCTGCGGC CGATGCCGCT
CCTCGCCGCG CCCCCCGGGC GGATGGCGGT CAGGCGCCTT CTGCCGCGCC TCAGGTGCGT
ATTATTTCAC GGCCTGCGCC CGGCAGCCAG CCCGACCGCA GCACGCGGCC CGCTGGCGGA
CGTCCCGGCG CTCCGGGTGG CCCCCGCGGC GACAGCGCCG GCAGGCCCCC GCGTCCCGGT
GGTCCCCGTC CCAGTGGTCC CGGCGGTCCC AGACCGGCAG GTGGTCCCCG TCCCGGCGGA
TTCGGCCAGC AGCCTGCTGC GCCCGCATCC CCCACTGACA CCCGCGATGG CCAGAGCAAG
AAAAAGCGCC TCAAGGGCCG CCGCACCGTG GATTTCCAGC AGGGAGATTT CGGCGGACGC
CGTGACGACG ACGACAGCCA GCGCCTGAAC CGGGGCAAGG GCCGCCGCAA GGGCGGCAAG
CCCACTTCCT CGCAGGCCAC CCAGCCGCTC AAGGCCGCAA AGCGCAAGAT CCGTGTTACC
GAGGCGATCC GTGTGGCCGA CATGGCTCAC CAGATGGGCC TCAAAGCCAA CGAGATCATC
AAGGTTCTCT TCGGGCTGGG CGTTATGGCC ACCATCAACC AGGCCCTGGA CTTCGACACG
GCCACTCTGG TGGCTTCCGA ATTCGGCTAC GAAGTGGAAA AGGCCGGCTT CTCCGAAGAC
GATTACCTGA CCCCCAAGGA AGTGGACGCG CCTGAAACCC TCAAGCCGCG CCCGCCCGTT
GTGACCATTA TGGGTCACGT CGACCACGGC AAGACCTCGC TGCTTGACGC CATACGCAAG
TCCAACGTCA CCAGCGGCGA AGCCGGGGGC ATTACCCAGC ATATCGGCGC CTACCACGTA
AAGACCAAGC GCGGCGAGAT TGTCTTCCTT GACACGCCCG GCCACGAAGC CTTTACAGCC
ATGCGCGCCC GCGGTGCCCA GGTGACGGAC CTTGTCATCC TTGTGGTAGC TGCCGACGAC
GGCGTGATGG AGCAGACCCG CGAGGCCATC AACCATGCCC GCGCCGCCGG TGTACCCATC
ATGGTTGCCG TCAACAAGAT GGACAAACCC AGCGCCGACC CTGACCGCGT ACTGCGCGAA
CTGGCCGAAC TGGGCCTGCA GGCCGAAGAA TGGGGCGGCG ACACCATTGT TGCCAAGGTG
GCCGCCAAGA CCCGCATGGG CCTTGACGAT CTGCTTGAAA TGGTGGCCCT GCAGTCTGAA
ATTATGGAGC TCAAGGCCAA TCCCGACAAG GCCGCCAAAG GCCACATCGT GGAAGCCAAA
CTCGACAAGG GCCGCGGCCC CGTGGCTACC GTACTCATCC AGGAAGGAAC CCTGCGCCAG
GGCGACAGCT TTGTGTGCGG CCCCTTCTCC GGCCGGGTGC GCGCGCTCAT GAACGACCAG
GGCAAAAAGG TCAAGGAAGC CGGGCCGTCC CTGCCTGTTG AAGTGCAGGG CTTTGAGGGC
GTGCCTGAAG CCGGTGAAGA GTTCTTTGTG GTCAGCGACG AAAAGCTGGC CCGCCGCATC
GCCGACTCTC GCGCCATCAA ACAGCGCGAA CGCGAACTGG CCTCCGAATC GCGCGTTACG
CTCGAAACAT TCCTGTCGCA ACGCAAGTCC GATCAGGAAA CACTTACGCT CAACCTGGTG
CTCAAGTCCG ACGTGCAGGG CAGCCTTGAA GCCATCACGG AAGCGCTGCT CAAGCAGAGC
ACCGACAAGG TACGCATCAA CGTGGTGCAT GGCGGCACCG GCGCGATCAC AGAATCTGAC
ATTCTGCTGG CTTCTGCCTC GCAGGCCATC ATCATCGGCT TCAACGTGCG TCCCACAGCC
AAGATCAAGG ATGTGGCCGA GCACGAAAAT GTGGATATCC GCTTCTATGA GATCATCTAC
AAGCTGGTGG ACGACATCAA GAGCGCCATG GCAGGCCTGC TGGCCCCCGT GCAGCGTGAG
GTCTACCTCG GCCAGGCCGA AGTGCGCGAC ACCTTCAGTG TACCCAAGAT CGGCCTTATC
GCCGGCTCCT ATGTGGCCGA CGGCAAGATC GCCCGTAATG CCGGCGTGCG CCTGCTGCGC
GACGGCGTGG TGGTCTACAC AGGCAAGATC TCTTCCCTCA AGCGCTTCAA GGATGACGCA
AGGGAAGTGG TCAAGGGCAA CGAATGCGGC GTAGGCCTGG AAAACTTCAA TGACGTCAAG
ATTGGCGATA TCATTGAAGC CTTTGAAACA GTTGAAGAAG CAGCTACGCT GTAG
 
Protein sequence
MSEEKIKVSE LAKEFPAVPN KDMLRALREL GASAKSMAGS LTTEEAARVR EHFAEQKQAD 
AERSGSHPNV IVRRRRKDAD KADAPEVTEA APAAREEVAP PAEEKPAAVE APAQAEPVAE
APAASPHKVE EKAAPEAAKA EPAEKAKSSK ARVVSAARVI SRPGEEEEKK PEPVVESKPE
PVAEISPVAA ALAAREAAAR AEEKSSEKGE EKGAKAARLA RPDASAMPEG SSAPTLPQRA
PEARTEAWKD ADASAAADAA PRRAPRADGG QAPSAAPQVR IISRPAPGSQ PDRSTRPAGG
RPGAPGGPRG DSAGRPPRPG GPRPSGPGGP RPAGGPRPGG FGQQPAAPAS PTDTRDGQSK
KKRLKGRRTV DFQQGDFGGR RDDDDSQRLN RGKGRRKGGK PTSSQATQPL KAAKRKIRVT
EAIRVADMAH QMGLKANEII KVLFGLGVMA TINQALDFDT ATLVASEFGY EVEKAGFSED
DYLTPKEVDA PETLKPRPPV VTIMGHVDHG KTSLLDAIRK SNVTSGEAGG ITQHIGAYHV
KTKRGEIVFL DTPGHEAFTA MRARGAQVTD LVILVVAADD GVMEQTREAI NHARAAGVPI
MVAVNKMDKP SADPDRVLRE LAELGLQAEE WGGDTIVAKV AAKTRMGLDD LLEMVALQSE
IMELKANPDK AAKGHIVEAK LDKGRGPVAT VLIQEGTLRQ GDSFVCGPFS GRVRALMNDQ
GKKVKEAGPS LPVEVQGFEG VPEAGEEFFV VSDEKLARRI ADSRAIKQRE RELASESRVT
LETFLSQRKS DQETLTLNLV LKSDVQGSLE AITEALLKQS TDKVRINVVH GGTGAITESD
ILLASASQAI IIGFNVRPTA KIKDVAEHEN VDIRFYEIIY KLVDDIKSAM AGLLAPVQRE
VYLGQAEVRD TFSVPKIGLI AGSYVADGKI ARNAGVRLLR DGVVVYTGKI SSLKRFKDDA
REVVKGNECG VGLENFNDVK IGDIIEAFET VEEAATL