| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2687 |
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| Symbol | |
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| ID | 7272509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2817199 |
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| End bp | 2818848 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643571278 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002467674 |
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| Protein GI | 219853242 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.719039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAGGGT TACGCGATCT GATCAGCGGG TTCAAAAGCG GAGAGGTTAA GGAATCCGGA
CCTCAAAAGT CGCAATCATT CTTTTCATCC CTGAAGAGTA AGGTCACTGA TGATAAGAGG
ATCGCCGAGT ATGACCCGGC TGTCCATGGA TCTCTGGTGG ATCGGACCCT CCCGAATGAG
TATGAACTGA TCGAGAGCTA CTGGGTCGAC GAAGGGTGCT CCCAGGTGAA TATCGTCCAT
AACAGAAAGA CCCAGCAGGA TGAATATGTG CTCTATGAAC CCGAACTCTC CCCGTTTGAG
TATGAACTGA TCGAGCGGAT CTTTGAGGAT CTCCGTGATG TGCTGATCCT GACTGACGAT
GAGATCGGGT TTGACAAGAA CCAGCTCCTC TTTCAGAAGA TGAATGGTCT TCTGGTCGAG
TACGGGCTGG TACTCGAACA GTCGACGATG TTCAAACTCC AGTACTTCCT TATTCGGAAC
TTCCTTGGCT GGTCCCGTAT CGATGCGGTG ATGAAGGACC CCCATATCGA GGATATATCC
TGTGATGGGA CCAATATTCC TCTCTTCCTC TATCACCGGA AATACCGGAA CATCAAGACC
AACATCAAGT TCGACGAGGA GTCGCTTATC TCCCTCGCCA TTAAACTGGC TCAGCGTTCA
GGAAAGCATA TCTCGATCGG GAGTCCCTTA ATCGATGCGA CGCTTCCGGA TGGGTCACGG
TTGCAGCTGG CACTCGGAAA GGAGGTCACC TCCCGGGGGA CATCGTTCAC GATCCGAAAG
TTCCGTGAGG AGCCGTTCAC TCCGATTGAA CTGATGGAGT ATCATACTTT CAATGCAGAT
GCTCTGGTCT ATTTCTGGCT TGCGATTGAG AACAACAAGA GTCTCCTCTT CATCGGGGGC
ACAGCATCAG GGAAGACCAC CTCTTTAAAT GCCGTCTCGC TTTTCATCAC CCCGCTTGCA
AAGGTGGTCT CGATCGAGGA TACCCGTGAG ATTACGCTGT ACCATGACAA CTGGATCGCT
TCGGTGACCA GGGAGTCGGT GGCTGAGAGT TCATCGACGA TCGATATGTT CGCCCTGCTG
AAGTCTGCGA TGCGGCAGCG GCCTGAGTAC ATCATTGTGG GGGAGGTCCG AGGGAACGAG
GCCCAGACCC TCTTCCAGGC GATGAACACT GGCCATACCA CCTTCTCGAC GATGCATGCA
GGGAGTGTGG ATGCGGCCAT CCACCGTCTT GAGAGCGAAC CGCTGAATGT TCCTCGGAAC
ATGGTGCAGG CGCTGAATGT GATCTCGATT CAGGGGCTGA TCTACCAGGG TACAGCCAGG
GTGCGCCGGT GTCAGGAGAT CGTCGAGGTG GTCGGGATCG ATCCGTCGAC CGGAAACCTC
CGGGTGAACA ATGTCTTCAC CTATGACCCG ATCAGAGATG TGATCGCGTA CACCGGAAGA
TCACAGGTCT ATGCCTCGAT CGCCGAGCGG CGGGGATGGT CACGGGACCA GCTCGATGAG
GAGATCGCCC TTCGAAAGGA ACTGTTGATG GCGATGCATG ATCAGGATAT CCGGGATTAC
CGGTCTGTGT CACGAATCTT CCAGGCCTAT TACATCGATG CACAGCGGGT GATGCGCGTC
AAGACTGATC TTCGCAGGAT ACTTGAATGA
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| Protein sequence | MTGLRDLISG FKSGEVKESG PQKSQSFFSS LKSKVTDDKR IAEYDPAVHG SLVDRTLPNE
YELIESYWVD EGCSQVNIVH NRKTQQDEYV LYEPELSPFE YELIERIFED LRDVLILTDD
EIGFDKNQLL FQKMNGLLVE YGLVLEQSTM FKLQYFLIRN FLGWSRIDAV MKDPHIEDIS
CDGTNIPLFL YHRKYRNIKT NIKFDEESLI SLAIKLAQRS GKHISIGSPL IDATLPDGSR
LQLALGKEVT SRGTSFTIRK FREEPFTPIE LMEYHTFNAD ALVYFWLAIE NNKSLLFIGG
TASGKTTSLN AVSLFITPLA KVVSIEDTRE ITLYHDNWIA SVTRESVAES SSTIDMFALL
KSAMRQRPEY IIVGEVRGNE AQTLFQAMNT GHTTFSTMHA GSVDAAIHRL ESEPLNVPRN
MVQALNVISI QGLIYQGTAR VRRCQEIVEV VGIDPSTGNL RVNNVFTYDP IRDVIAYTGR
SQVYASIAER RGWSRDQLDE EIALRKELLM AMHDQDIRDY RSVSRIFQAY YIDAQRVMRV
KTDLRRILE
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