| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2350 |
|---|
| Symbol | |
|---|
| ID | 7272071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2494498 |
|---|
| End bp | 2495055 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643570953 |
|---|
| Product | GrpE protein |
|---|
| Protein accession | YP_002467356 |
|---|
| Protein GI | 219852924 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.190024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACAG AAAAAGTGGA AGATACAGCA GAGAATCAGC ATGGATCTTC AACAGCCGAT
AAGGCAGCCG GCTCGGCCGC AGATATGGCC GCTGACACGG CGTCCCAATC ACCCGGTACC
GACGAGTTGA AGAAGGCCTA TGAAGAACTG AATGACCAGT TTCTCCGGCT TGCCGCAGAT
TTTGACAATT ACAAAAAGCG GATGGCAAAG GAGCAGAATC TTCGGATCAC CACAGCCATC
GAACAGTTCA CTGTTGAGAT ACTTGAGGTG ATGGACAATC TGGAACGTGC AGAGAAGACT
GATGATGCGC ACCTTCGCGA AGGGCTTAAC CAGATTAGAA AGCTCTTCAT GGCCATCCTC
GGTCGGCATG GCATCCAGTC GATCGATTGT CTGAACGAGC CGTTCGACCC GGCTGCCCAT
GAAGCGATTG CGTACGTCCC TGCCGAGGCA GCGGATGGCG TGGTGATAGA TCAGGTCGCC
CGTGGGTACC GGATGAATGA TAGGATTATC AGATGCGCAA AAGTCGCAGT TTCAAAAGGA
AATAACAGGG AGGCATAA
|
|---|
| Protein sequence | MGTEKVEDTA ENQHGSSTAD KAAGSAADMA ADTASQSPGT DELKKAYEEL NDQFLRLAAD
FDNYKKRMAK EQNLRITTAI EQFTVEILEV MDNLERAEKT DDAHLREGLN QIRKLFMAIL
GRHGIQSIDC LNEPFDPAAH EAIAYVPAEA ADGVVIDQVA RGYRMNDRII RCAKVAVSKG
NNREA
|
|---|
| |