| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1628 |
|---|
| Symbol | |
|---|
| ID | 7272170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1675082 |
|---|
| End bp | 1675639 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643570241 |
|---|
| Product | YeeE/YedE family protein |
|---|
| Protein accession | YP_002466663 |
|---|
| Protein GI | 219852231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.303699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCT CTCTCCATGC CAATAAGAGA GCCCAGATCG TGCTCGGCCT CCTCTTCGGG
ATCGTCTTCG GGTTTCTGCT CCAGAAAGGC GGGGTTACCA GGTACGACGT GATCATCGGG
CAGCTCCTGC TCACCGACTT CACGGTGCTG AAGGTGATGC TCTCGGCGGT GATCGTCGGG
ATGGTCGGGT TTCACCTGCT CAAACAGTTC GGGCTTGTGG AACTTCATGC CGCCGAAGGG
ACAGTCGGTT CGAACGTGAT CGGCGGGCTG ATCTTCGGGG CCGGGTTTGC CCTGCTCGGG
TACTGCCCGG GGACGGTGGC CGGTGCGGTC GGAACCGGGG CCCTCGATGC CCTCGCTGGC
GGAATGGTCG GGCTCTTGAT CGGGTCTGGG ATCTTCGCAC GCCTCTACCC CAGGTTGAAG
ACCCGGGTGC TCATCTATCT CCCCTTCCCG GCCAGGACGG TGCCCGAGTT CCTGCATCTG
AACGTCTGGA TCGTGATCGC CGTAATGGAG GTTGGGATGA TCGGGTTCCT GCTGGTGCTC
GGGTATCTCG GGTTCTGA
|
|---|
| Protein sequence | MLTSLHANKR AQIVLGLLFG IVFGFLLQKG GVTRYDVIIG QLLLTDFTVL KVMLSAVIVG
MVGFHLLKQF GLVELHAAEG TVGSNVIGGL IFGAGFALLG YCPGTVAGAV GTGALDALAG
GMVGLLIGSG IFARLYPRLK TRVLIYLPFP ARTVPEFLHL NVWIVIAVME VGMIGFLLVL
GYLGF
|
|---|
| |