| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1371 |
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| Symbol | |
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| ID | 7269976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1410483 |
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| End bp | 1411646 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643570003 |
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| Product | aminotransferase class V |
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| Protein accession | YP_002466425 |
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| Protein GI | 219851993 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00447816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.862029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATTA AACGCCCGAT ATACATGGAT TCACACGCAA CTACCCCTGT CGACCCTCGC
GTGTTCGAAG CGATGCTCCC CTATTTCTCC GAGATCTTCG GGAATGCCGG CAGTATCGAT
CATAACTATG GGGCGGTGGC TGCTGATGCA GTGAAGAAAG CCCGGGAACA GTGTGCCCAT
ATCCTGAACG CTCAGTCCGA GGAGATCATT TTCACGAGCG GGGCGACCGA GTCCGATAAC
ATCGCTATTC TTGGTGTTGC CGAGCAGTAC GCTGCTAAGG GCGATCATAT CATCACCTGT
GTTACCGAGC ACAAGGCCGT GCTTGATACC TGCAAGCATC TCCAGATGGC CGGCAAATCT
GTGACGTATT TACCAGTTGA CCATTATGGG CTTGTCGACC CCGGCCAGGT TGAAGACGCC
ATCACCGAGA AGACTGTATT GATCTCCATC ATGGCGGCGA ACAACGAGAT CGGGACGATT
GCACCCATCA AAGAGATCGG GGAGATTGCT CACAAACACG GCGTGCTCTT CCATACCGAT
GCAGCGCAGG CCGTCGGCCA TATCCCGATG GATGCTAAGG AGATGAACAT CGATCTGCTG
TCCTTCTCCG GTCATAAGAT CTATGGGCCG AAGGGGATCG GCGGTTTGTA TGTCCGGGGG
AGCAAGCCCC GTGTGAAATT ATCGCCGATT GTCTTTGGTG GCGGGCAGGA GAAGGGGATT
CGCTCGGGGA CGCTGAATGT AACGGGTATC GTTGGGCTCG GAGAGGCGCT CGCAATTGCT
AGGAAGGAGA TGGGCAAGGA AGAAAAGCGG TTCCGTCAGT GGACAATGCA GATGTTCGAT
GCGTTCAAAG AAGCGTATCC ATCGGTGATG TTGAATGGGC ATCCAACCCA GCGGCTTGCT
CACAACCTGA ATGTCTGTTT CCCTGGCATC GAGAGCAAGG CATTGATTCA TTTATTGAGG
GACGATGTAT CGATATCTGC TGGCTCTGCC TGCACGACCA CGAGCGTTGA GCCATCGCAT
GTGTTACTTG CGATTGGACG GACAGTCGAG GAGTCCCACT CGGCGGTGCG ATTTGGATTG
GGGAGAGGGA ATTCGGAGAA GGAAGTGGGG TTGGGGATAA AAAAGGTATA CGATTATTTG
AAACAATTAG AAAAATTAAA ATGA
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| Protein sequence | MEIKRPIYMD SHATTPVDPR VFEAMLPYFS EIFGNAGSID HNYGAVAADA VKKAREQCAH
ILNAQSEEII FTSGATESDN IAILGVAEQY AAKGDHIITC VTEHKAVLDT CKHLQMAGKS
VTYLPVDHYG LVDPGQVEDA ITEKTVLISI MAANNEIGTI APIKEIGEIA HKHGVLFHTD
AAQAVGHIPM DAKEMNIDLL SFSGHKIYGP KGIGGLYVRG SKPRVKLSPI VFGGGQEKGI
RSGTLNVTGI VGLGEALAIA RKEMGKEEKR FRQWTMQMFD AFKEAYPSVM LNGHPTQRLA
HNLNVCFPGI ESKALIHLLR DDVSISAGSA CTTTSVEPSH VLLAIGRTVE ESHSAVRFGL
GRGNSEKEVG LGIKKVYDYL KQLEKLK
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