| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1052 |
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| Symbol | |
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| ID | 7271786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1081710 |
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| End bp | 1083200 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643569688 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002466122 |
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| Protein GI | 219851690 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.923754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.334038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAGTA CCAGTCAGGG AACGGATCAG AAAGGATTGA ACCTTCTGAT CCTCTCCATC
TCCCTCGCAA CGTTCATGTC GTCACTGGAC GGAACGATCG TCAATATCGC CCTGCCGACC
ATCTCTTCGG TGTTCAATAT CTCTTCGAGT ACCGTGAGTT GGGTTGCGAC CATTTACCTG
CTGGTGATGG CTGGCTGCGT CCTGATCTTC GGTAAGTTGT CGGACAGTGT CGGGTTTAAA
AGAATGTTCC TATCAGGATT TGTAATCTTT ACCCTGGGAT CGTTCTTATG CGGTCTGCTC
CCGGACCTCC TATCTTCATT CTTCGCGCTC ATCGGTTCAC GTGCATTCCA GGCAATAGGC
GGTGCCATGA TAACAGCGAT TGCGCCGGCG ATGATCGCTG CATACATCCC CATGAAGCAG
AAAGGAAAAG CGATGGGAAT CGTTATGACC GTCGCTGCAC TCGGGACCGC CATCGGACCG
ACCATCGGTG GAGTCCTCAC CCAGTACATC TCCTGGCACT GGATATTTTT CATCAACGTA
CCGGTGGGAA TCTGTGCAAT CATACTGGGG TTACGTGTTA TTCCCACCAC TCAGCCCCAC
AATAAAAATG CCGGCTTTGA CAGAGCCGGC GCGTTGTTGA TCTTCACCGG CCTCGCTGCA
CTGCTCTTTG CGGTTTCAGA AGGGCAGTCG CTTGGGTGGG ATTCCCCGGT GATCCTCGGT
TCCCTTGCCC TCGCTCTCAT TACACTCGGT TACTTTGTAT GGCACGAACT CAGGACCGCT
GACCCTCTGC TGGAACTCCG TCTCTTTAAA AACAAGAACT TCCTGATGAC CAATCTTGTC
CTTTCGCTGG TCTTCTTCAG TTTTGCCGGT ATCAGTTACC TGCTCCCGTT CTATCTTCAG
TACATCAAAG GGTTCAGTTC CTCAGATGCA GGGATGATAA TTACCGCCCT ATCGGTTGCC
ATGATGGTCT CCGGCCTTCT TTCAGGAGCG CTGTATAACC GGGTTGGTGG CAGGATACTC
TGCATCGCTT CGGGGATCTT CCTGGTTGCC GGTTATTTTA TGATGACCCT CCTCCGGGTC
GACACCTCAA TCGGATTTGT GATTCTCTGT CTGCTCGTGC TCGGTTTCAG CCTTGGCCTG
ATGATCACAC CGGCATCGAA TATGATCATG AACTCGGTTG CTAAGCGATA CCAGGGGATG
GTCTCCAGCC TCACGAGCCT TGAACGATTC GCACCGTTGA CCCTGGGGAT TGCTTTTGCA
AACCTGGTCT TTATTCAGGG GATCACAGCA ATTGCTGACA ACCGGGGGAT CACGGAGAGC
GCACCGGTTA ACATCAAACT GCACCTGATT ACTGCTGGTT TTGACCTTGC CTTCTTCTTC
TCACTGGTTA TTGCGGTCAT CATCCTCATC CTCACCCTGC TCGCACGACA GGAAGTGCAC
CCGGACTACC AGTCAGGCAC CGATGAGGAT GCTCTGAATA GTACAATCTA A
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| Protein sequence | MESTSQGTDQ KGLNLLILSI SLATFMSSLD GTIVNIALPT ISSVFNISSS TVSWVATIYL
LVMAGCVLIF GKLSDSVGFK RMFLSGFVIF TLGSFLCGLL PDLLSSFFAL IGSRAFQAIG
GAMITAIAPA MIAAYIPMKQ KGKAMGIVMT VAALGTAIGP TIGGVLTQYI SWHWIFFINV
PVGICAIILG LRVIPTTQPH NKNAGFDRAG ALLIFTGLAA LLFAVSEGQS LGWDSPVILG
SLALALITLG YFVWHELRTA DPLLELRLFK NKNFLMTNLV LSLVFFSFAG ISYLLPFYLQ
YIKGFSSSDA GMIITALSVA MMVSGLLSGA LYNRVGGRIL CIASGIFLVA GYFMMTLLRV
DTSIGFVILC LLVLGFSLGL MITPASNMIM NSVAKRYQGM VSSLTSLERF APLTLGIAFA
NLVFIQGITA IADNRGITES APVNIKLHLI TAGFDLAFFF SLVIAVIILI LTLLARQEVH
PDYQSGTDED ALNSTI
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