| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0608 |
|---|
| Symbol | |
|---|
| ID | 7270195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 596169 |
|---|
| End bp | 597335 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643569256 |
|---|
| Product | protein of unknown function DUF181 |
|---|
| Protein accession | YP_002465702 |
|---|
| Protein GI | 219851270 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1944] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03266] putative methanogenesis marker protein 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATC AACTCCTGCA CCAGCGAAAA GAATTCTATG CCGGAACTCA CCGGGCAGTC
CCACCAGAGG AGACCGATCG GCGGGTGCAG CCGCTGATGG AGGGGATCGG GCTCGAATCG
ATCAGGGAGA TCACCGATAT CGACCGGCTC GGGATCCCCT GTGTGGCCGC AGAGCGAGCG
AGCGCCCGGG ATATTGTAAT GCTGGTCCAT GCCGGCCAGA CCCTCCTGCA GGCGAAGGTG
GCGCTGAAGA TGGAGGCAAT TGAGCGCTAT TCTGCAGAGT ACCGACATGA ACCTCTGCAA
TTCGGCAGTC TCGAACAGAT CGGTATCGCC AGGGCCGTCG ACCCTGAGGA ACTGATTCTT
CCGCGGACCG TCGACATGTG CGAGCCGCTC CACTGGTCTG ATGGCTGGGA CCTGATCGGT
CGGGAGGAGG TGGTCGTCCC CTCCAATGCT GTGATTCACC CCTACGACAC CCGGGGGATG
ACGACCGCAC TCTATCCGAG CGACCCCTGG GGGCTCGCAG CAGGAAATGT ACCTGAAGAG
GCGATCGTTG AAGGTATCTG CGAGGTGATC GAGCTGGACG CGCTGAGTGT TGCCGAGCGG
ACTCACTCGA TGGGCCGGCG ACTGCAGGTC GATGACGACC CTGCAGCGGC GGCGCTGATG
GATAAGTTTG ATGAGGCGGG GGTCGTTGTC ACCCTCTGGT TGCTCGATGG AAGGACCGGG
GTGCCGACGG TCGCGGCAGT GGCAGACGAT CAGCAGACCC GGGATCCCAC CCTGCTGGTG
ATGGGGGCAG CGACTCATCC TTCCCCCTCG ATCGCGGCTC AGCGCGCCCT GATCGAGGCT
GTACAGGGAC GGGCGGTCAG ACTTTACTAT CGCGACAACG AACCTGAACG GGATGCGCTG
ATCCGGAGGG CAGGATACGA CCGTATGAAG CGGATCAACC ACGAATGGTT CGCTCCAGCT
GGTTCGGTCT CCATCGCTGA CGTTCCCGAT CTCTCCACCG AGTATCTCGA TGACGATGTC
AGAGCGCTCT GCGGCGCGGT CGAGGGGCAT GCCGAGCGGA TCTGTGTCTG TGACCTGCAG
AAGACCGACA TCCCGGTGGT GCGCGTGGTG ATCCCCGGGT TTGAGGTCAC CCATCAGAAC
CCGGATCGGG TCCGGCGCTC CCGGTGA
|
|---|
| Protein sequence | MMNQLLHQRK EFYAGTHRAV PPEETDRRVQ PLMEGIGLES IREITDIDRL GIPCVAAERA
SARDIVMLVH AGQTLLQAKV ALKMEAIERY SAEYRHEPLQ FGSLEQIGIA RAVDPEELIL
PRTVDMCEPL HWSDGWDLIG REEVVVPSNA VIHPYDTRGM TTALYPSDPW GLAAGNVPEE
AIVEGICEVI ELDALSVAER THSMGRRLQV DDDPAAAALM DKFDEAGVVV TLWLLDGRTG
VPTVAAVADD QQTRDPTLLV MGAATHPSPS IAAQRALIEA VQGRAVRLYY RDNEPERDAL
IRRAGYDRMK RINHEWFAPA GSVSIADVPD LSTEYLDDDV RALCGAVEGH AERICVCDLQ
KTDIPVVRVV IPGFEVTHQN PDRVRRSR
|
|---|
| |