| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0022 |
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| Symbol | |
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| ID | 7270134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 21872 |
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| End bp | 22828 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643568681 |
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| Product | ribonuclease HIII |
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| Protein accession | YP_002465141 |
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| Protein GI | 219850709 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1039] Ribonuclease HIII |
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| TIGRFAM ID | [TIGR00716] ribonuclease HIII |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.094163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTAT TCCAGGCATC ACCCCCTGAC GAGTTCTACC AGGAGATCGC AACCAGACTG
AATGCAGCCG GGATCCAGGC CGGACCCAGA CGGACGATCG CCTACGGGTT CCAGTTCCAG
GTCAGCACCA GCGAGTGGTC GACCCTGCTC AGGGTCTACC AGAAGAAGTC CGGGGCGGTC
ACGGTCGACT ACTCGCAGGT AAGAAACAGC CAGGCCGAGG CGGCCCTGAA GGCGGCGATC
GCCGGCAGAG AGGTGTCGAC TCCGCAGACA GCAGATCCAT CCGGTACACT AAAGAACCTG
GCCGCCCTTC CGCTGTTGAT CGGAAGCGAT GAATCGGGCA AAGGGGACTA CTTCGGACCG
CTGGTCGTGG CTGCCGTCTG CCTGGATCAG CAGGGCGCCG CCAGGCTCAG GGCGGCTGGG
GTGACGGACA GCAAGGCGCT CTCCGACCAG GAGAACCTGT CCCTGGCCTC CGTGGTCAGA
AAGGTAGCGG TCAGCATCTC GGTGAAGGTT CTCCTCCCAG AGGAGTATAA CGCCCGGTAT
GCGGCCACAG CCAGAGCCGG TGGAACATTG AACGACCTCC TCGCATCGGT CCATGCCGAA
GCGATCCAGA GGGTGGCAGC AGAGAGCGGG TGCACCACAG TGCTCGTCGA CCAGTTCGCC
GGGGAACGGG TACTCGACGA TCTGCTCGCC GTCCGGTACC CCGGTCTTCG GGTCGTTCAG
CGACCCAGGG CAGAGCAGGA GACTCCAGTA GCGGCGGCCT CGGTGCTGGC CCGGGCACGG
TTCCTTGAGG ACCTGGACCT GCTCGGCATG CCGTACAACG TCCATCTGTT AAAAGGGGCT
TCTGCAGGCG TGACCAAACA GGCTGCGCAG ATGGTCGATC GATACGGCTC TGGCGTGCTC
CGGACGGTGG CAAAAATTCA CTTCCGGACC ACTTCAAAGA TCTGCAGAGA CTACTGA
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| Protein sequence | MSLFQASPPD EFYQEIATRL NAAGIQAGPR RTIAYGFQFQ VSTSEWSTLL RVYQKKSGAV
TVDYSQVRNS QAEAALKAAI AGREVSTPQT ADPSGTLKNL AALPLLIGSD ESGKGDYFGP
LVVAAVCLDQ QGAARLRAAG VTDSKALSDQ ENLSLASVVR KVAVSISVKV LLPEEYNARY
AATARAGGTL NDLLASVHAE AIQRVAAESG CTTVLVDQFA GERVLDDLLA VRYPGLRVVQ
RPRAEQETPV AAASVLARAR FLEDLDLLGM PYNVHLLKGA SAGVTKQAAQ MVDRYGSGVL
RTVAKIHFRT TSKICRDY
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