| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0003 |
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| Symbol | |
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| ID | 7270115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2211 |
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| End bp | 3377 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568662 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_002465122 |
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| Protein GI | 219850690 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00871395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGGATC GGATATCTGA ACGGGCCCGG GTGATCCCAC CGTCAGGGAT CAGGAAGTTC
TTTGATATCG TCCAGACGAT GGACGAAGTG ATCTCACTCG GTGTCGGCGA GCCGGACTTT
GTGACCCCCT GGAACATTTG TGAGGCCGCG ATCTACTCGA TCGAGCAGGG GAAGACCTCG
TACACCTCGA ACCGGGGGCT TCAGAACCTC CGCGAGGCCC TTGCGGCACG GATGGAGCGG
GTATATGCCC TCCAGTACCA CCCTGACCGG GAGATGATTA TCACCACCGG CGTGAGCGAA
GGGGTTGATA TCGCGGTCCG CGCGATCGTC GACCCGGGTG ACGAGGTGTT GATTGCAGAG
CCGAGCTATG TTTCGTACGC TCCCACAGTG ACCCTGACCG GTGGGGTTCC GATATCAGTG
GAGTGTCGAG AGGCAGATCG GTTCAAGCTG AACCCCGATA CCCTCGCCGA AGCGATAACA
CCGAAGTCCA AGGCCCTGAT CATCAACTTC CCGACCAACC CGACCGGAGC CGTGATGACC
AGGTCCGACT ACCGGGAGAT TGCCGATCTG ATCACCGACC ATGACCTTAT CCTGATCAGC
GACGAGGTCT ATGCCGAGCT GACCTATGAA GGGACGCATG TCCCTGCGGC CACGGTCGGT
GACCTCTGGG AGCGGACGAT CACGCTGAAC GGTTTCTCCA AGGCCTACGC GATGACTGGC
TGGCGGCTCG GGTACCTCTG CGCTCCAGAA GATCTCTGCG ATGCAGCCTT GAAGATCCAC
CAGTATGTGA TGCTCTGTGC TCCGATTATG GCCCAGATGG CGGCGAATGA GGCTATTCGA
TCTGCAGAGG AGGAGAAGGA CGCGATGATC AAAGAGTACC GGCAGCGGCG GAACCTCTTC
GTCGAGGGGT TGAATCATAT CGGCCTCCAC TGCCATCTGC CGGAGGGTGC GTTCTATGCG
TTCCCGTCTA TTGCCTCCAC CGGCCTTTCG GACGAGGACT TCGCCGAGCA GTTGCTGCAT
GAGCAGCATG TGGCGGTCGT CCCGGGATCG GTCTTCGGGG CTGGCGGAGT TAACCATATC
CGCTGCGCCT ATGCGGTCTC ACGGCCGGAC CTGACCGAGG CGGTCAGACG GATCGGTCTC
TTCATCGCTG ACCACCAGCG GGCTTGA
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| Protein sequence | MKDRISERAR VIPPSGIRKF FDIVQTMDEV ISLGVGEPDF VTPWNICEAA IYSIEQGKTS
YTSNRGLQNL REALAARMER VYALQYHPDR EMIITTGVSE GVDIAVRAIV DPGDEVLIAE
PSYVSYAPTV TLTGGVPISV ECREADRFKL NPDTLAEAIT PKSKALIINF PTNPTGAVMT
RSDYREIADL ITDHDLILIS DEVYAELTYE GTHVPAATVG DLWERTITLN GFSKAYAMTG
WRLGYLCAPE DLCDAALKIH QYVMLCAPIM AQMAANEAIR SAEEEKDAMI KEYRQRRNLF
VEGLNHIGLH CHLPEGAFYA FPSIASTGLS DEDFAEQLLH EQHVAVVPGS VFGAGGVNHI
RCAYAVSRPD LTEAVRRIGL FIADHQRA
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