Gene Cagg_3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3673 
Symbol 
ID7268208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4467158 
End bp4468213 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content55% 
IMG OID643568479 
Productpermease 
Protein accessionYP_002464945 
Protein GI219850512 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA TTTTTACCAA ACCTTCTCGT CAATCTGACA GCCGCGCGTG GCTGATCGTC 
GTTGGGGCAG CAGTCATCTG GCTCATCGCG TACAACACAA TCCAGCCTTT AGCCAACTGG
CTAACCTATG ATCTGATCGG TTTAGACGAA GGTTCGCATT TGGGTGAATC GGTCGCCTTT
TTCCTTTATG ATGTGCCGAA GATTCTCTTG CTCTTGAGCG GGATGATCTT TGTGATCAGT
ACGTTGCGCT CGTTCTTTAG CCCCGAGCGT ACCCGTGCCT TTCTAGGCGG CAAACGTGAG
GGAGTTGGCA ATATCCTCGC TGCCGGATTA GGTGTCTTGA CGCCATTTTG CTCGTGCTCG
GCAGTACCAC TCTTTATCGG ATTCGTCGAG GCCGGCATCC CGCTTGGTGT GACCTTCTCG
TTCCTGATCG CTGCGCCGAT GGTGAACGAA GTCGCGCTGG TGATGCTGTT CGGGACGTTT
GGCTGGCAGG TGGCACTGCT CTACCTTGTG GCTGGGATGA GTGTAGCTAT TGTGGCCGGG
GTCATTATTG GGCGGCTCAA GCTAGAACGC TACGTCGAAG AGTTCGTTTG GCAGATCAAA
GGCGGCGGCG GTACAGTCGC GCTAGAGAAC CCAACGTGGG CCGAGCGGTT TGCCGGTGCG
TGGGAGAATA CACGCGAGAT TGTCGGCAAG GTATGGTTCT ATGTGGTCAT TGGTATTGCC
ATCGGCGCCG GAATTCACGG TTACGTGCCT GAAGATGCAT TGGCCGGTAT TCTAGGCCGT
GATGCGTGGT GGTCGGTACC GGCAGGTGTT GCTTTAGGTG TACCGCTCTA CTCGAATGCT
GCCGGCATTA TTCCGGTCGT GCAGGCGTTG ATGGCGAAGG GTGCGGCCCT AGGGACAGTA
CTGGCGTTTA TGATGGCGGT GGTAGCGCTC AGCTTGCCGG AGATGATTAT TTTACGGCGC
GTGCTGAAGC CGCAATTGAT TGCCGTGTTT GTCGGCGTTG TGGCGAGCGG GATTGTATTG
GTAGGGTATT TGTTTAATGT GGTGATGGCG AACTAG
 
Protein sequence
MEQIFTKPSR QSDSRAWLIV VGAAVIWLIA YNTIQPLANW LTYDLIGLDE GSHLGESVAF 
FLYDVPKILL LLSGMIFVIS TLRSFFSPER TRAFLGGKRE GVGNILAAGL GVLTPFCSCS
AVPLFIGFVE AGIPLGVTFS FLIAAPMVNE VALVMLFGTF GWQVALLYLV AGMSVAIVAG
VIIGRLKLER YVEEFVWQIK GGGGTVALEN PTWAERFAGA WENTREIVGK VWFYVVIGIA
IGAGIHGYVP EDALAGILGR DAWWSVPAGV ALGVPLYSNA AGIIPVVQAL MAKGAALGTV
LAFMMAVVAL SLPEMIILRR VLKPQLIAVF VGVVASGIVL VGYLFNVVMA N