Gene Cagg_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2288 
Symbol 
ID7266701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2791423 
End bp2791998 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content52% 
IMG OID643567118 
Productlipoprotein signal peptidase 
Protein accessionYP_002463603 
Protein GI219849170 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.643499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGC GTTGGATGCT TCTCATGTTT GTGGCTGTGC CGGTTGTGAT CCTTGATCAA 
CTAAGTAAAG CTTGGTTGAG CACCGTATTA CTGCGCGTCA ATCGTCCAAT TAGTTTGCTC
TTTGATTGGG TGCAACTGGC CTACTACGAA AATACCGGAG TTGCGTTTGG TCTTTTTCCC
GATCAGGGTG GTGTTCTCTC GATTAGTGCC GGCTTCATCT TGTTGGTGTT GGCCCTCACT
TACCAATACC TGTTACCTGC CGAATCGCGC TGGGTAACGG TGGCTACCGG CTTGGTGTTT
GGTGGTGGTC TTTCTAACCT CTTCGACCGC TTACGGCAAG GGTACGTGGT CGATTTTATC
CAGTTTGGTT GGTGGCCAAT GTTTAATCTG GCCGATAGTG CGATTACCTT AGGCGTGGCG
GCCTTGGCAT TTCACATCAT CTTTATCGGT GATGAGCCGT CTGGTATCGA ACCGGAACCG
ATCGATGACG GGTTGCTGAA CGAGTTGCTG AGCCGCGCAC CAGAATCCCC ATCGCCGACC
GAGCCATCGC AACGCAATTC GGAGTTACCG TCATGA
 
Protein sequence
MRKRWMLLMF VAVPVVILDQ LSKAWLSTVL LRVNRPISLL FDWVQLAYYE NTGVAFGLFP 
DQGGVLSISA GFILLVLALT YQYLLPAESR WVTVATGLVF GGGLSNLFDR LRQGYVVDFI
QFGWWPMFNL ADSAITLGVA ALAFHIIFIG DEPSGIEPEP IDDGLLNELL SRAPESPSPT
EPSQRNSELP S