Gene Cagg_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0502 
Symbol 
ID7266999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp618967 
End bp619749 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content53% 
IMG OID643565365 
ProductYceI family protein 
Protein accessionYP_002461877 
Protein GI219847444 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000406201 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000051699 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAATCC GACGTACCGT ACTGATCCTT GGTGTAATCA TCATCCTTGC GCTTGGCGGT 
TTAGCGATCT ATGTGTTTCG TCCACCGGAA GCGGCAAGTG GTCCAATAGA GGCAGTACCG
TTAGTTTTGC CAACTGCCGT ACCGACGGCC ACCGCTCCCA CAACAGAACC GGTTGCCACC
CCACCTGCGG GCACAACCGA CGCCTCACCC GCCGCAACGC CGACCACTCT CCCCAACCAA
GCGGTATTAC AGCTCTTTGC AATCGATCAA AATCGATCCG AAGCCCGCTT CTTAATCGAC
GAGGTATTGC GTGGGCGCCC GGTGACAGTG GTTGGCGTCA CCAATCAAGT GGCCGGCCAG
ATCGCTCTCG ATCCAAATGT ACCAAGCGCA GCGCAAGTAG GGGTCATTCA GATTAATGCA
CGCACCTTAG CTACCGATAA CGAGTTTCGC AATCGGGCAA TTAAAAATGC AATTCTGCGC
ACCAATCAGT TTGAATTCAT CACATTTACT CCACGTACAA TCAATGGCTT ACCGGAGAGT
GTTACCATCG GTGTGCCGTT TGAATTTACC ATTGAAGGTG ATTTAACTAT CACCGATGTC
ACACGGCCGG TCACATTTAC GGTGACGGTA ACCCCGATGA GCCCTACCGA GATCAGCGGT
CTCGCCCAGA CAACGATACT CTACCGGGAT TTCAACCTCA CGATCCCCGA CTCGCCATCG
GTTGATACGG TTGCCGATGA AGTCCGGTTA GAGCTAGAGT TCGTTGCCAC TCTGATCGGC
TGA
 
Protein sequence
MTIRRTVLIL GVIIILALGG LAIYVFRPPE AASGPIEAVP LVLPTAVPTA TAPTTEPVAT 
PPAGTTDASP AATPTTLPNQ AVLQLFAIDQ NRSEARFLID EVLRGRPVTV VGVTNQVAGQ
IALDPNVPSA AQVGVIQINA RTLATDNEFR NRAIKNAILR TNQFEFITFT PRTINGLPES
VTIGVPFEFT IEGDLTITDV TRPVTFTVTV TPMSPTEISG LAQTTILYRD FNLTIPDSPS
VDTVADEVRL ELEFVATLIG