| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4719 |
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| Symbol | |
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| ID | 7261748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5037049 |
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| End bp | 5038452 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643564630 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_002461150 |
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| Protein GI | 219670715 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00408234 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATAG GATATGGCTT GAACCTGGAG CAGACACAGA AGTTGATCAT GACGCCGGAG
TTGCGTCAAG CGATTGCCGT TTTACAGTTA TCCGCTTTAG AACTCTCCGG TTATGTGGAG
CAGCAGATGC TGGAAAACCC TCTTCTCGAT GTGATTGACG ATTCCGCCGA CAAAAGCGCG
GATCATACCC AGGAAGATTC CCCGGCTCAA GAGAAGAACG AGGGGGCGGA GGAAGGGCCC
TGGGATATGA ACTGGGAAGA GTATTTTCAA CATCAGGAAG AACGCATCAG CAAGGAGTAT
GACCCGGACG CCGGGCAAAG CACCCGCTTT GAGCCTTTTT TAGCGGCAGG TCCTTCCCTT
CAGGAGCATT TGCTGGAACA GATTCATATT CAAAAGGTTC CCATGTCCCA GAAGCTGCTT
GAATATATTG TCGGCAATTT GGACGATAAC GGCTATTTAA CCCTTTCTTT AGAGGAAATA
GGGAAGCAGC TCCAGCTTCC CCTTGAGGAA GTGGAAAAAG GCTTAGCGGT GATTCAAGGG
CTGGACCCTT TGGGGGTGGG GGCAAGAAGC TTGGAAGAAT GTCTGTTGCT GCAGCTTCCC
CTGCTGGCAG ACTACCCTCC GGAGCTGCCT GAATTTCTTA AGTATCTGGA GGATTTAGCT
GCCGGTCGTT TGCAGAGGAT CGCCGCCCAG CTCAAAATTA CCCCCAGTCA GGTTCAGGAT
ATGGCCGATT TAATCCGCAC CCTGGATCCT AAACCCGGCC GGAGCTTTGC CGGGACCGGC
GAGGTGCGCT ATATCGTTCC CGACGTTGTG GTTGAAGAGG TTGAGGGCGA ATATATTATC
CTGGTCAATG ATGTGACCGT ACCCCGTTTG GGAATTAATC AGGTCTACCG CAAAGCCTTA
AGTCAGAATA ATGAATCAGA GATTCGCAAA TTTGTCGAGC AGAAACTCAA TGCGGCAGCC
TGGCTGATTC GCAGTATCGA GCAAAGACGG CTCACTCTTT ATAAGGTTGC GGATGCTATT
ATCAGACGCC AGGAAGAGTT TTTGCGGCGG GGCATCCGCT GTTTAAAACC CCTCAATCTC
AAAGACATTG CGGAAGAGAT CGGGGTCCAC GAGTCCACGG TCAGCCGGGC TACGGCTAAT
AAATATATCC AAACCCCCCG GGGGATTTTT GAGTTTAAGT TCTTTTTTGC TACGGGGCTG
GGCAGTGAAC AGGGCATGGC CACGGAAGGA ATTAAACAAG CCCTGAAAGA GATCATTGCC
GCCGAGGATC CCAAGAGTCC GTATTCCGAT CAAAAGCTTT CCGAGATTCT TAAAGAAAAG
AATATGGAGA TTTCACGACG AACTGTGGCA AAATACCGGG ATGAACTGGG GATTCCGTCC
ACGGCGCTGC GGAAACGCTA TTAG
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| Protein sequence | MRIGYGLNLE QTQKLIMTPE LRQAIAVLQL SALELSGYVE QQMLENPLLD VIDDSADKSA
DHTQEDSPAQ EKNEGAEEGP WDMNWEEYFQ HQEERISKEY DPDAGQSTRF EPFLAAGPSL
QEHLLEQIHI QKVPMSQKLL EYIVGNLDDN GYLTLSLEEI GKQLQLPLEE VEKGLAVIQG
LDPLGVGARS LEECLLLQLP LLADYPPELP EFLKYLEDLA AGRLQRIAAQ LKITPSQVQD
MADLIRTLDP KPGRSFAGTG EVRYIVPDVV VEEVEGEYII LVNDVTVPRL GINQVYRKAL
SQNNESEIRK FVEQKLNAAA WLIRSIEQRR LTLYKVADAI IRRQEEFLRR GIRCLKPLNL
KDIAEEIGVH ESTVSRATAN KYIQTPRGIF EFKFFFATGL GSEQGMATEG IKQALKEIIA
AEDPKSPYSD QKLSEILKEK NMEISRRTVA KYRDELGIPS TALRKRY
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