Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4334 |
Symbol | obgE |
ID | 7261359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4597533 |
End bp | 4598807 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643564251 |
Product | GTPase ObgE |
Protein accession | YP_002460775 |
Protein GI | 219670340 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA [TIGR03595] Obg family GTPase CgtA, C-terminal extension |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00027074 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTACG ATCAGGCAAA AATCTATGTT AAAGGTGGAG ACGGCGGAGC CGGGGCTGTG GCGTTTCGCC GTGAAAAATA CGTTCCTGAG GGTGGCCCCA GCGGTGGCGA CGGGGGGCGG GGCGGCAAGG TCATCTTTAT CGCCGATGAA GGACTCAGGA CATTGGTGGA TTTCCGTTAT AAACGCCATT ACAAGGCTGA TCGCGGGGAA CATGGACAGG GAAAGAATAT GCACGGGAAG AGCGGGGAGG ATATGAGCGT CCGCATTCCT GTAGGCACCG TTGTTAAAGA TGCGGATACA GGGGAAATCC TCGCCGACTT GATTGAGCAT GGGCAAAAAG TTGTCGTTGC CAATGGCGGC AGAGGCGGCC GCGGTAATGC TCGTTTTATG AGCAATACCA ATAAAGCCCC CACTGTAGCG GAAAACGGCG AACCGGGAGA GGAACGGAAC CTCCTTCTGG AGCTGAAGCT TTTGGCCGAT GTAGGACTGG TGGGATTTCC CAATGTAGGC AAGTCGACGA TCATTTCCCG AATCTCGGCG GCTAAACCCA AGATTGCGGA TTATCATTTT ACTACGCTGG TGCCCAATCT TGGGGTAGTT GAGCTGGAGG ATGGGGAAAG TTTCGTGGTG GCGGATATCC CCGGGCTGAT TGAAGGGGCT CACACCGGAG CCGGACTGGG TCATGAATTT CTCAGACATA CGGAAAGAAC CCGTCTGATT CTTCATGTCC TGGATATTGC AGGCTCTGAG GAGCGGGATC CCCTGGAAGA TTTTCAAATC ATTGCGGAAG AGCTTCGCCA ATATAGTCAG GAGCTGGCTA ACCGCCCGAT CTTGATCGTG GCCAATAAAA TGGATATTCC CGGTGCGGAG GAAAATCTGC AGCGCTTGAC AGAGAAGCTG GGGGAAGACT ACCGTATTTT TCCGGTATCT GCAGCTACAG GAGAAGGGCT GAAGGAATTG GTTTATGCTG CCGCGAAAGC GTTGCCGGAA ATTCCTGCAC CCCAGATCTT TGTGCGGGAT GAGGAACAGC ATAAACTGAC TCAGGCGTCA GCTCCGCATC GCTTTGAACT GACCCGTGAA GGGGATTTCT TTGTTGTCTC CGGTAAGGAA GTTGAAAAAC ATGTGCAGAT GACCATGTTC GATCGGGAGG ACGGGCTTTA TCGCTTCCAG AATATCCTCA AGGCGATGGG AATTGAACGC GCTTTGCTGG ATGAAGGTAT AAAAGTGGGA GATAAGGTTC GGATCGCCGG GATCGAGTTC GAGTGGGAAG AGTAA
|
Protein sequence | MFYDQAKIYV KGGDGGAGAV AFRREKYVPE GGPSGGDGGR GGKVIFIADE GLRTLVDFRY KRHYKADRGE HGQGKNMHGK SGEDMSVRIP VGTVVKDADT GEILADLIEH GQKVVVANGG RGGRGNARFM SNTNKAPTVA ENGEPGEERN LLLELKLLAD VGLVGFPNVG KSTIISRISA AKPKIADYHF TTLVPNLGVV ELEDGESFVV ADIPGLIEGA HTGAGLGHEF LRHTERTRLI LHVLDIAGSE ERDPLEDFQI IAEELRQYSQ ELANRPILIV ANKMDIPGAE ENLQRLTEKL GEDYRIFPVS AATGEGLKEL VYAAAKALPE IPAPQIFVRD EEQHKLTQAS APHRFELTRE GDFFVVSGKE VEKHVQMTMF DREDGLYRFQ NILKAMGIER ALLDEGIKVG DKVRIAGIEF EWEE
|
| |